Rhizobium etli bv. phaseoli IE4803: IE4803_PD00031
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Entry
IE4803_PD00031 CDS
T03667
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rep
Rhizobium etli bv. phaseoli IE4803
Pathway
rep02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rep00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IE4803_PD00031
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rep02000
]
IE4803_PD00031
Transporters [BR:
rep02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
IE4803_PD00031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AJC83236
LinkDB
All DBs
Position
pRetIE4803d:26594..27604
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AA seq
336 aa
AA seq
DB search
MKTTFAFAAVAAFVAVSAPAHADSMVFSSWGGTTQDAQKAAWASPFTEKTGITVVQDGPT
DYGKLKAMVEAGEVNWDVVDVEGDYAAQAGKNGQLEKLDFSVIDKSKLDPRFVTDYSVGS
FYYSFVIGCNVDAVKACPKTWADLFDTTKFPGKRTFYKWSAPGVIEAALLADGVPADKLY
PLDLDRAFKKLDTIKSDIIWWSGGAQSQQLLASAEAPFGSVWNGRMTALAATGIKVETSW
EQNITAADALVVPKGAPNAEAAMKFIALATSAEPQAALAKATGYAPINLDSAKLMDPETA
KTLPDQQTASQVNADMNYWADNRDAIGEKWYAWQAK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccacatttgctttcgcggcggttgccgcattcgtggcggtctccgcgccggcg
cacgccgacagcatggtcttctcgagctggggcggaacgacccaggatgcgcagaaggcg
gcatgggcaagcccgttcaccgagaaaaccggcatcaccgtcgtccaggacggcccgacc
gactacggcaagctcaaggccatggtcgaggccggcgaagtcaactgggatgtcgtcgac
gtcgaaggcgactatgccgcccaggccggcaagaacggccagctcgagaaactcgacttt
tccgtcatcgacaaatccaagctcgatccgcgcttcgtcaccgactattcggtcggcagc
ttctattattccttcgtcatcggctgcaatgtcgatgccgtcaaagcctgcccgaagaca
tgggccgacctgttcgacacgacgaagtttcccggcaagcgcacattctacaagtggtcg
gctcccggcgtgatcgaagccgcactgcttgccgacggcgtgcctgccgacaagctttat
ccgctcgatctcgaccgcgccttcaagaagctcgataccatcaagtcggatatcatctgg
tggtcgggcggcgcccagtcgcagcagctgctggcctccgccgaagcgcccttcggcagc
gtctggaacggccgcatgacggcgcttgcggcgaccggcatcaaggttgaaacctcctgg
gagcagaacatcacggctgccgatgcgctcgtcgtgccgaagggcgcgccgaatgccgag
gcggcgatgaagttcatcgcgctggcaacctcggccgaaccgcaggctgcccttgcaaag
gctacggggtacgcgccgatcaatcttgactcggccaagctgatggacccggaaaccgcc
aagaccctgccggatcagcagaccgcaagccaggtcaatgccgacatgaactactgggct
gataatcgcgatgccatcggcgagaagtggtacgcctggcaggcgaaatag
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