Rhizobium etli bv. phaseoli IE4803: IE4803_PD00112
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Entry
IE4803_PD00112 CDS
T03667
Name
(GenBank) Rhs repeat-associated core/peptidase C39-like domain-containing protein
Organism
rep
Rhizobium etli bv. phaseoli IE4803
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Peptidase_C39
TEN_YD-shell
DUF4595
DUF6885
TPR_2
HEPN_Cthe2314
VAR1
Motif
Other DBs
NCBI-ProteinID:
AJC83316
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All DBs
Position
pRetIE4803d:138864..143540
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AA seq
1558 aa
AA seq
DB search
MLAVGLAMAAPIVPDNKASSERVDELFNAIGLPEPLVSTGSVSEAESNALREAVTSFTQN
PDLSNNNKLAEYLDRFPQSNWAPAINVNLGLLYLHDGYFTRAIAAWQQAWELGRDAKEPQ
ARALVDRAVGELALLYANLGQTEELKAFLQDVGDRPVVGSATERFQVAHEQMTLVKNDPR
HMFICGPLALRALMLERHAEIDSVNFLLWYRASDNGTSLEEVSQLADKVKLDHQLIKRSA
GQKVPVPSIVHWKVGHFAAVVGVANGRFHIRDSVFDGSDMWVTQAALDEETTGYFLVPKD
VTGDPGWQQLGASDALKVWGKGPTSATRIGDAGDPNASDPDPDSPLPNSPWLGLSRPGSS
GECPLCVYNIKESSVSVSLSDTPVGYEPPIGPSMKVRISYNQREDSQPQNFNFYNVSPKW
SLNWLSYVTDDPTNAGANVSRFLSGGGSFVYKGFDAGTRRFAAQDDDGSILVLASQAPVE
YRRLLRDGSVEIYTQSDGATAYPRRVFLSQIRDPQGNAAILNYDTQRRLTSVTDAVGRQT
TLTYGLPDSPLLVTRVTDPFGRSAKLTYDANGRLSSITDIIGLTSSFTYDANSLVNKLTT
PYGETNFAYTAPGTTAPPRFVQVTDPLGFKEREEWLEPAPIPASDPTATVPVGMPAGVIN
NYLTYRNSFHWDKSAYVAAGCTDTGGCDYTKARIRHFVHMPDSSIKGTALESVKYPLENR
KWYNYPGQTGSQASIIGGTYSEPTAVARVLDDGSTQMSQYSYDTAGFLNLTKQIDPLGRT
TSYLYANQIDLAAVTQSTEFGQQTILAQFTYNGQHRPVSATDAAGQTTLYRYNTVGQLVS
ETNPLGQKTSYGYDSAHNLQTVTNANDAVAASYTYDAKVRIKTYTDSEGWSVIYAYDDAD
RVTSITFPDGTAKRFAYDRLDLVSYRDREGKLWLYQYDANRRLTKVTDPSGNDTLIGYNE
RGQVASLTDPKGNATSWAYDIQGRLSSKTYADLTSITYAYENTISRLKSVLDPLGQTKQY
AYGRDDSLAGISYLNVVNPTPNVSFSYDSYFPRLTAMADGSGTTNYQYEPPFQSGALGLQ
SECFTATGAVDCSHTIDYAYDELGRLSSRQIAGGGPETFGYDAIGRLVDHASDLGAFKIS
YLGQTSQRTVQQLLPQTSNLNTTWSYLDNTHDRRLAGVGNAGLAAGQYTNFTFQTTPENT
ITQTIQSSDTAVARPSSAAQAVNFNILNEVSEVSGHAYSYDANGNLLSDGERTFAWDAED
RLVKILYASQPGKLTNFSYDGRDRRVEIQETPAGGGLASTTVYVWCGSVICQARDESNTP
SKAYVKEGEYKYGASNPSLFYGIDQLGSVRRVFLSGGSAPSYDFDPWGRAIQPVTAISDF
GFGGYFNQQSAGLSLTLFRAYDTILGRWLSRDPIGENGDTTNLYTYVASDPLSRIDPTGK
VGLQWPPGLPFPWPPNSPNACPVPSGMAGLSGPLFPSDPSADQSPLISPMAPPRGYWPLD
KGAAEWGRRHDIPVRKAKDRAHRAKQKDKGRARDDYGVDPETGDIANPDGEVIGNLDE
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccgttggtctggcaatggcagcaccgatcgttccggataataaagcaagctcc
gaacgtgtcgacgagttgttcaacgccattggcctgccagaacctttggtctcgacgggg
tcggtttccgaggcggaaagcaacgctcttcgcgaagcagtaacgtccttcacgcaaaat
cctgatctctcaaacaacaacaagcttgccgagtacttggatcgcttcccgcagtcgaac
tgggctcctgcgatcaatgtcaatcttgggctgctctatttgcatgacggctatttcacg
cgggcgattgcggcttggcaacaggcatgggagcttggtcgtgacgcgaaagagcctcaa
gcgcgtgcgttggtcgatcgtgcggtcggtgagcttgccttgctctatgcaaacctcggg
caaacggaagagctgaaagctttcctgcaggacgtcggcgatcggcccgtcgtgggctcg
gccactgaacggttccaggtcgcgcacgaacaaatgacgttggtcaagaatgatccccgc
catatgtttatctgcgggccgctggctttgcgcgctctcatgctcgagcgtcacgccgaa
atcgacagcgtcaactttctcctgtggtatcgagcaagcgacaacggaacgagccttgaa
gaggtcagccagcttgctgacaaggtaaagctcgatcaccagctgataaagcgatctgcc
ggacagaaggttcctgttccctccatcgttcattggaaggtggggcactttgctgccgtc
gtcggtgtagcaaatggacgtttccatatccgtgactcggtattcgacgggtccgacatg
tgggttacgcaagccgcactcgatgaagagaccaccggatattttcttgtccccaaggat
gtcactggcgatccaggttggcagcagcttggtgcatccgacgcactgaaagtctggggc
aaggggccgaccagtgccacgagaatcggtgatgcgggcgatccaaacgcgtccgatccc
gatccggattctccacttccgaactccccttggctcgggctatctcgacccggttcgagt
ggtgaatgcccgctttgcgtctacaacatcaaggagtcgagcgtcagcgtatccctgtcg
gatacgcccgtcggctatgagccacccatcggcccgtcgatgaaggtgaggatcagctat
aatcagcgcgaagacagccagccgcagaacttcaatttctataatgtcagcccaaagtgg
agcctgaactggctgagttatgtgacggatgaccccacaaatgctggggccaatgtgtcg
cgcttcctatcgggcggcgggtcctttgtttacaaaggttttgatgccggaaccagacgt
ttcgcagctcaggatgacgatggttcgatcctcgttctggcgtctcaagcacctgtggaa
tatcgccggttgcttcgagatggttcggtcgaaatctacacccagtcagacggtgctacc
gcttatccgcggcgggtgtttctcagccaaattcgcgatcctcagggtaatgctgcgatc
ttgaactatgacacccagcggcggcttacctccgtgaccgatgcagtcggacgccagacg
acgcttacatatggcttaccagacagcccgctactggtcacaagggtgacggatcctttc
ggcagaagcgcaaagctcacctatgatgcgaacggccgcctgtcctcgatcactgatatc
atcggtcttacctccagcttcacttatgatgccaattccttggttaataagctgacaacg
ccgtatggcgagacgaacttcgcctatacagcgccaggaaccaccgcgccgccgaggttt
gttcaggtcaccgatccacttggtttcaaagagcgcgaagaatggcttgagccggcccca
attcctgcaagcgatcccactgcgaccgtgcccgtgggaatgcctgccggagtgattaac
aattatctcacctaccgcaacagcttccattgggacaaaagcgcctatgttgcggccggc
tgcactgacacaggcggttgcgactatacaaaggctcgcatacggcatttcgtgcatatg
ccggattcatcgatcaagggtacggcactcgagagcgtcaagtatccgctcgaaaatcgc
aagtggtacaattatcctggccagaccgggtctcaggcaagcatcatcggagggacctat
agcgagcctaccgctgtcgcgcgtgttttagatgacggctcgactcagatgagccaatat
tcctacgataccgcgggctttcttaatttaaccaaacaaatcgatccgttgggacggacg
acctcctatctctatgccaaccagattgatcttgccgctgtcacgcagagcaccgagttt
ggccagcagacgatccttgcccaattcacctacaacggccaacacaggccggtgagtgca
acggatgccgcagggcaaacgacgctttatcgctacaatacggtcgggcagttagtttcc
gaaacgaatccgctgggtcaaaagaccagctacggctatgacagcgcccacaatctacaa
accgtcaccaatgccaatgatgccgtagccgcctcatatacatacgacgccaaagtccgc
atcaaaacttacacggattccgaaggctggagcgttatctatgcctatgatgacgctgac
cgggtaaccagcattacctttcccgacgggaccgccaagcgcttcgcctatgaccgcctc
gaccttgtttcctatcgcgatcgcgagggcaagctgtggctgtaccaatatgatgccaat
cggcgattgacgaaggtcactgatccatccggcaacgacacactgatcggttacaacgaa
cgcgggcaagtcgcatctttgaccgatccaaagggaaatgcgacgagctgggcgtatgac
atccagggccgtttaagcagcaagacttacgccgatctcacaagcatcacctacgcttat
gaaaacaccataagccgcttaaagtctgtcctcgacccgctcggacaaacaaaacaatat
gcctatgggcgagacgatagcctggcgggcatctcttatctgaacgttgttaatccgaca
cccaatgtgtcgttctcctacgacagctattttccacggttaacggcgatggccgacggc
tcgggtacaacaaactatcagtacgagccgccattccagagtggtgctctcggtctgcaa
tccgagtgtttcactgctaccggtgccgtggactgctctcatacaatcgattacgcctat
gatgagctcggccgactatcgagccgccagattgccggcggtggccctgaaacgttcgga
tatgacgctatcggtcgccttgtcgatcacgcaagcgacctaggcgccttcaagatcagc
tatctgggacaaacatcgcaacgcactgttcagcaattgcttccccagacgtccaacctc
aataccacgtggagctatctagacaatacccatgacaggcgtcttgcgggcgttggcaat
gcaggcttggcggctggccaatatacaaacttcacattccaaacgacaccggaaaacacg
attacgcagaccattcagtcaagcgacactgccgtcgcccgaccctcttctgcagcccag
gccgtcaacttcaatattctcaatgaagtgtccgaggtttcgggccatgcctacagttac
gacgcgaatggtaatctcctgtcagatggtgagcgaacctttgcttgggatgcagaggat
cgactcgtaaagatattgtacgcctcccagccgggaaagctgacgaacttttcatatgac
gggcgcgatcggcgtgtcgagatccaagaaacgcctgccggcggaggtttagcctccact
acggtctatgtttggtgcgggagcgtgatctgccaggcacgcgacgaatctaacacgcca
tcgaaagcatatgtaaaagaaggggaatataagtacggtgcatcgaatccctcgctattt
tatggcattgatcaactcggatcggttcgacgtgtttttctaagcggcggtagcgcaccc
agttacgacttcgatccctgggggcgggcgatccagcctgtgacggctatttcggacttc
ggctttggtggatatttcaatcagcaaagcgccggcctcagcttaacactattcagagcg
tatgatacgatactaggccgctggctatctcgcgatcccatcggcgaaaatggcgatacg
acaaatttgtacacatatgtggccagcgatccgctgtctcggatcgaccccactgggaag
gtagggcttcaatggccgccgggtctgccgtttccctggccaccaaattcaccaaacgct
tgtccggtccctagcggtatggcaggtttgtccgggccgctgttccccagcgacccttcc
gctgatcagtctccgctgattagcccaatggcccctccgcgtggttattggccgctggac
aagggggcagctgaatgggggcgtcgacacgacatccctgtcagaaaggctaaagacagg
gctcatcgtgcgaaacaaaaagacaaggggcgagcaagagatgactatggtgttgatcct
gaaacaggcgatattgctaatccagacggagaggtgatcggaaacctagatgaataa
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