KEGG   Prescottella equi: REQ_13440
Entry
REQ_13440         CDS       T01352                                 
Name
(GenBank) conserved hypothetical protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
req  Prescottella equi
Brite
KEGG Orthology (KO) [BR:req00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:req03016]
    REQ_13440
Enzymes [BR:req01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     REQ_13440
Transfer RNA biogenesis [BR:req03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    REQ_13440
 Prokaryotic type
   tRNA splicing ligases
    REQ_13440
SSDB
Motif
Pfam: RtcB CoxE_N
Other DBs
NCBI-ProteinID: CBH47431
UniProt: A0A3S5Y4J9
LinkDB
Position
1399030..1400274
AA seq 414 aa
MAWAIPASFVPDRSRTVSPTEYDHNLVNFASHIDDGTLAQARETASMPFVYPHIALMPDA
HFGKGSAVGTVIPTRGAVIPAAVGVDIGCGMIAARTQFGLVDIERGGGAGRTLHTLRLGV
ERAIPLSPGNYNLTASLRKWFAEPKIAELEERAARDGVDLSHSPKWREQLGSLGGGNHFI
ELCLDEEDRVWLFLHSGSRGVGNKIAQKHIAIAQKLCRTWHIGLPNRDLAYLAEGAPEFW
AYIRELRWAQRFALLNRAEMMDRFAEVFGEWIGAPVVEEERINCHHNYTEQEEHYGETVW
LTRKGAVDAHEGVDAVIPGSMGTRSYVVRGKGDARGLCSAPHGAGRRFSRTQARKRFTVA
DLADRMKGIEYRHGAEWIDEIPDAYKDIDVVMDDARDLVEVRHTLRQILNVKGT
NT seq 1245 nt   +upstreamnt  +downstreamnt
gtggcgtgggcgatccccgcgtcgttcgtccccgaccggagcaggacagtgagccccacc
gagtacgaccacaacctcgtgaacttcgccagccacatagacgacggaaccctcgcgcag
gcgcgggagaccgcgtccatgccgttcgtgtacccgcacatcgcactgatgccggacgcg
cacttcggcaagggttcggcggtgggaacggtgattcccacccgcggagcagtgatcccg
gcggcggtcggcgtcgacatcggatgcggaatgatcgccgcgcgaacgcagttcggcctg
gtcgacatcgagcgtggcggcggtgcgggacgaacgctgcatacgctgcgcctgggtgtc
gagcgcgcgatcccgctgtctccgggcaattacaacttgaccgcgtcgctcaggaagtgg
ttcgcggagcccaagatcgccgaactcgaggagcgggcggcgcgcgacggcgtcgatctc
tcgcactccccgaagtggcgtgagcagttgggttcgctgggcggcggcaaccacttcatc
gaactgtgcctcgacgaggaggatcgggtctggttgttcctgcactccggtagtcgtggg
gtggggaacaagatcgcacagaagcacatcgcgatcgcccagaagctctgccggacatgg
cacatcgggttgcccaaccgggatctcgcctacctggcggagggtgcgcccgagttctgg
gcgtacatccgggaactgcgttgggcacagcggttcgcgctgctgaaccgcgcggaaatg
atggatcggttcgccgaagtgttcggcgagtggatcggcgcgccggtggtggaggaagag
cggatcaattgtcaccacaactacaccgagcaggaagagcactacggagagacggtgtgg
ctcacccgcaagggggcggtggacgcgcacgagggcgtggacgcggtcattccggggtcg
atgggcacccggtcctacgtggtccggggaaagggcgatgcgcgcgggctgtgctccgcc
ccgcacggcgccggccgtcgattctccaggacgcaggcccgcaagcggttcaccgtggcg
gacctggccgaccggatgaaggggatcgagtaccggcacggcgccgagtggatcgacgag
atcccggacgcctacaaggacatcgacgtcgtcatggacgacgctcgagatctcgtggag
gtccggcacacgctgcggcagatcctcaacgtgaagggcacctga

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