Prescottella equi: REQ_15060
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Entry
REQ_15060 CDS
T01352
Name
(GenBank) putative DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
req
Prescottella equi
Pathway
req03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
req00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
REQ_15060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
req03019
]
REQ_15060
03009 Ribosome biogenesis [BR:
req03009
]
REQ_15060
Enzymes [BR:
req01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
REQ_15060
Messenger RNA biogenesis [BR:
req03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
REQ_15060
Ribosome biogenesis [BR:
req03009
]
Prokaryotic type
rRNA helicases
REQ_15060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
CMS1
UvrA_inter
HEM4
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CBH47584
UniProt:
A0A3S5Y4S3
LinkDB
All DBs
Position
1567016..1568848
Genome browser
AA seq
610 aa
AA seq
DB search
MSDTERDPQTDDNPITFADLQIDERVLKALSDVGYESPSPIQAATIPTLLEGKDVVGLAQ
TGTGKTAAFAIPILSRLDVDRKVPQALILAPTRELALQVAEAFGKYSAHIPGLQVLPIYG
GQAYGVQLSGLRRGAQIIVGTPGRVIDHLEKGTLDLSNLEYLVLDEADEMLKMGFQDDVE
RILADTPEYKQVALFSATMPPAIRKISKQYLHDPVEITVKAKTATASNITQRWVQVAHQR
KLDALTRILEVESFEAMIIFVRTKQATEDLAERLRARGFSAAAINGDIVQAQRERTIGQL
KSGALDILVATDVAARGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRTGDALLFVAP
RERHLLKSIERTTRQPLTEIQLPTVEDVNAQRVSKFGDSITESLNSENLALFRKLIEDYE
REHDVPLADIAAALAVQSRDGESFLMAPEPPAPPRREREPRERPARRFDDGGPSGPRVGR
DGQEFATYRIAVGKRHKVVPGAIVGAIANEGGLRRSDFGHISIRPDHSLVELPANLPKET
VEALRATRISGVLIQLQLDQGAPTGRQGRGGREDRAGGKFSRDRGDRGHRGDRGDRGDRG
DRFAKRRPRD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccgagcgcgacccgcagaccgacgacaatcccatcaccttcgccgacctc
cagatcgacgaacgggtgctgaaggccctttccgacgtcggctacgagtcgccctcgccg
atccaggccgcgaccatcccgacgctgctcgaaggtaaggacgtcgtcggcctggcccag
acgggtaccggcaagacggccgcgttcgcgattccgatcctgtcccgcctcgacgtcgac
cggaaggtgccccaggcgctgatcctggcgccgacccgcgagctcgcgctgcaggtcgcg
gaggcgttcggcaagtactcggcacacatcccgggtctgcaggtgctgccgatctacggc
ggtcaggcgtacggcgtccagctgtcgggcctgcggcgcggcgcccagatcatcgtcggt
acgcccggccgcgtgatcgaccatctcgagaagggcaccctcgacctctccaacctcgag
tacctcgtgctcgacgaggctgacgagatgctcaagatgggcttccaggacgatgtcgag
cggatcctcgccgacacgcccgagtacaagcaggtcgcactgttctccgcgacgatgccg
ccggcgatccgcaagatctccaagcagtacctgcacgatcccgtcgagatcaccgtcaag
gcgaagaccgcgacggcgtcgaacatcacccagcgctgggtgcaggtcgcgcatcagcgc
aagctcgacgcgctcacccgcatcctcgaggtcgagtcgttcgaggcgatgatcatcttc
gtccggaccaagcaggccaccgaggatctcgccgagcgcctgcgggcccgcggcttctcg
gccgccgcgatcaacggcgacatcgtgcaggcgcagcgcgagcgcacgatcggtcagctc
aagtccggtgcgctcgacatcctcgtcgccaccgacgtcgcggctcgcggcctggacgtc
gaccggatctcgcacgtcgtcaactacgacatcccgcacgacaccgagtcgtacgtgcac
cgcatcgggcgcaccggtcgcgcgggccgcaccggtgatgcgctgctgttcgtcgcgccc
cgcgagcggcacctgctcaagtcgatcgagcgcaccacgcggcagccgctcaccgagatt
cagctgccgaccgtcgaggatgtcaacgcgcagcgcgtctcgaagttcggcgactccatc
accgagagcctgaactccgagaacctggcgctgttccgcaagctcatcgaggactacgag
cgcgagcacgacgtcccgctcgccgacatcgccgccgcgctggcggtgcagtcgcgcgac
ggcgagtcgttcctcatggcgccggagccgccggccccgccgcgccgcgagcgtgagccg
cgggagcggccggcccgccgattcgacgacggcggtccgagtggcccgcgcgtcggtcgt
gacggccaggagttcgcgacgtaccggatcgcggtcggcaagcggcacaaggtcgtcccg
ggtgcgatcgtcggtgcgatcgccaacgagggtgggctgcgccgcagcgacttcgggcac
atcagcatccgacccgaccacagcctggtcgagctgccggcgaacctgccgaaggagacc
gtcgaggcgctgcgggccacccgcatctcgggtgtgctgatccagctgcaactcgaccag
ggtgcgccgacgggacggcagggccgcgggggacgcgaggaccgcgcgggcggcaagttc
agccgcgaccgcggcgaccgcggtcatcgtggtgaccgtggtgatcggggcgaccggggt
gaccgattcgcgaagcgtcgtccgcgcgactga
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