Prescottella equi: REQ_16390
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Entry
REQ_16390 CDS
T01352
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V beta subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
req
Prescottella equi
Pathway
req03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
req00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
REQ_16390 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
req03400
]
REQ_16390 (recB)
Enzymes [BR:
req01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
REQ_16390 (recB)
DNA repair and recombination proteins [BR:
req03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
REQ_16390 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
Motif
Other DBs
NCBI-ProteinID:
CBH47714
UniProt:
A0A3S5Y550
LinkDB
All DBs
Position
1709150..1712461
Genome browser
AA seq
1103 aa
AA seq
DB search
MTDTAIMTDTAFDLFAPLPQGTTVLEASAGTGKTYAIVGLAARFVAEEDVDLSQLLLVTF
SRAATKELRERTRERFASAAAGLADPIAARASEDPLVAHLADTDDAEIALRRRRLMQALS
DFDAGTIVTTHSFCQRMLDGLGIAGERDPDAVLVEEAEDLVAEVIADLFLHRFARADSRT
LRPADARAAARAAIFDPQSVLAPEDAEGTRAGDAVAFATAVRQETQRRKRLSGIRDFDDL
PALLHGVLTDPEHGEAACRRVRDRYRVVLVDEFQDTDPQQWGILRAAFHGHSTLVLVGDP
KQAIYAFRGAEVLSYLDAVGSAHSHQELTTNWRSDADLVAALGHLHGGAALGHRDIVVHP
VSAAKQVSRLHGAAPLRLRYLSRAGAGRLNNSGYPAVGALRSRVAADVAADIVELLGSGA
TLELNGVTRPVEPGDVAILAGTNAQIALVREALDRVGVPSVLAGGTSVFETPAATHWLQV
LQALEQPHRPDRVRLAALTPLIGWTAADVDARSDEVVARVGGQLRELATVFAQSGFAALF
ERLAAESGLEARLLTVAAGERTLTDLRHIGQLLGAVAVDESLGLTALTGWLTDRIKDPKS
GGGDRSRRLDSDAAAVQIATVHASKGLEYPIVYVPFGWSTGRYADPNRLLLHDEHGRRIL
DIGGEGSPGYGDRRRQRDAEAAGEDLRLLYVALTRAQCQLVLWWAPAYSTNEAPLHRMLF
GREPGEADVPQKVGVPEDPMVAEQLTRWAEAAPVTVEVQAVGAGPIPQPSWTPPQEETGE
LAAAVFARVLDAGWRRTSYTALTASAHEHPGVTSEAEEPEIEDEPEEPALIAAAPALGIP
STMNDMPYGAVFGTLVHEILEHVDTAAADLEAELVRHCREAVAARMSQVDPVALADALLP
VLRTPLAGGGTLADITPRDRLPELDFELPLAGGDDPAVLTVTLHRIVDLLRNHLPADDVL
APYADRLATLEPTPLRGYLTGSIDAVLRLEGPRFVIVDYKTNRIAPGEVTTADFTRESMA
GEMMRSHYPLQALLYAVALHRYLRWRLPGYDPATHLGGVQYLFVRGMVGPDTPDGAGVFD
WDPSAALVVELSDLLAASVEETA
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
gtgacggacaccgcgatcatgaccgacaccgccttcgatctgttcgcgccgctgccgcag
ggcaccacggtgctcgaggccagcgccggcaccggtaagacgtacgcgatcgtcgggctc
gcggcccgcttcgtcgccgaggaggacgtcgacctctcccagctactgctggtcacgttc
agtcgcgccgccaccaaggaattgcgcgagcgcacccgggagcggttcgcctccgccgct
gccggattggcggaccccatcgccgcgcgcgccagcgaggatccgctggtcgcgcacctg
gccgacaccgacgacgccgagatcgcgctgcggcgccgacggttgatgcaggcgctgtcg
gacttcgacgccggcaccatcgtcaccacccacagcttctgccagcgcatgctcgacggt
ctcggcatcgcgggcgagcgtgacccggatgcggtgctggtcgaggaggccgaggacctg
gtcgccgaggtgatcgccgacctgttcctgcaccgcttcgcccgcgccgactcccgcacg
ctgcgccccgccgacgctcgcgccgccgctcgggccgcgatcttcgacccgcagtcggtg
ctcgcccccgaggacgccgagggcacccgcgccggggacgccgtcgcgttcgccaccgcg
gtccggcaggagacccagcgccgcaagcggctgtccggcatccgagacttcgacgacctg
cccgcgctgctgcacggcgtgctcaccgatcccgagcacggggaggcggcgtgccgccgg
gtgcgcgaccgctaccgggtggtgctggtcgacgagttccaggacaccgacccgcagcag
tgggggatcctgcgcgccgcgttccacgggcactccacgctggtgctggtcggcgacccc
aagcaggccatctacgcgttccggggcgcggaggtgctcagctacctggacgcggttggg
tccgcgcacagccatcaagagctcaccaccaactggcgcagcgacgccgatctggttgcc
gcactggggcatctgcatggcggcgcggccctggggcaccgggacatcgtcgtgcatccg
gtgtcggcggcgaagcaggtgtcgcggctgcacggcgcggcgccgctgcggctgcgctac
ctgtcccgggcgggtgccggacggctcaacaactccggctacccggccgtcggggcgttg
cgttcgcgggtcgcggcggacgtggccgcggacatcgtcgaactgctcggcagcggagcc
actttggaactgaacggcgtcacgcggcccgtcgaacccggcgacgtcgccatcctcgcc
ggcaccaacgcccagatcgcgctggtccgcgaggcgctggaccgggtcggggtgccgtcg
gtgctggccggcggcaccagtgtcttcgagacgcccgccgccacgcactggctgcaggtg
ctgcaggcgctcgagcagccgcaccgccccgaccgggtgcggctcgcggcgcttaccccg
ctcatcggctggaccgccgccgacgtcgacgcccgcagcgacgaggtggtcgcccgggtc
ggcgggcagctgcgggagctggcgacggtgttcgcgcagtccgggttcgcggcgctgttc
gagcggctcgccgccgagtccgggctcgaggcgcggcttctgaccgtggccgcgggcgag
cgcacgctcaccgacctgcggcacatcgggcagctgctcggcgcggtcgccgtcgacgag
tccctgggtctgactgcgctcaccggctggctcaccgaccgcatcaaggacccgaaatcc
ggtggcggcgatcgcagccggcgcctcgacagcgacgcggccgccgtgcagatcgcgacc
gtgcacgccagcaagggcctcgagtacccgatcgtgtacgtgccgttcgggtggagcacc
ggacgctacgccgatcccaaccggctgctgctgcacgacgagcacggccgccgcatcctc
gacatcggcggcgagggcagccccggctacggcgaccgccgccggcagcgcgacgccgag
gcggcgggcgaggacctgcggctgctgtacgtcgcgctcacccgtgcccagtgccagctg
gtgctgtggtgggcgccggcatactccaccaacgaggcgccgctgcaccggatgctgttc
gggcgcgagccgggggaggcggacgtcccgcagaaggtcggcgtgccggaggacccgatg
gtcgccgagcagctcacccgctgggcggaggccgcgccggtgacggtggaggtgcaggcc
gtcggcgccggcccgatcccgcaaccgtcgtggacgccgccgcaggaggagaccggcgag
ctggcggccgccgtgttcgcgcgggtgctcgacgccggctggcgccggacgtcgtacacg
gcgctcaccgcgtcggcgcacgagcatcccggcgtcaccagcgaggccgaggaaccggag
atcgaggacgagccggaggagccggcgctcatcgcggccgcgcccgccctgggcatcccg
tcgacgatgaacgacatgccctacggcgcggtgttcggcacgctggtgcacgagatcctc
gagcatgtcgacaccgccgccgccgacctcgaagccgagctggtgcggcactgccgcgag
gccgtggccgcgcggatgtcgcaggtcgatccggtggcgttggccgacgcgttgttgccg
gtgctgcgcaccccgctcgccggcggcggcaccctcgccgacatcaccccgcgggaccgg
ctgcccgagttggacttcgagctgccgctcgccggtggtgacgacccggcagtgctcacg
gtgacgctgcaccggatcgtggacctgctgcgcaaccacctgcccgccgacgacgtcctc
gcgccgtacgcggaccggctcgcgacgctcgagccgacgccgctgcggggttatctcacc
ggcagcatcgatgcggtgctgcggctcgagggtccccggttcgtgatcgtcgactacaag
accaaccgcatcgcgcccggcgaggtcaccaccgcggacttcacccgcgagtcgatggcc
ggggagatgatgcgctcgcactacccgctgcaggcgctgctgtatgccgttgcgctgcac
cggtatctgcgctggcgcctgcccgggtacgacccggcgacgcatctgggtggggtgcag
tacctgttcgtgcgcggcatggtgggccccgacaccccggacggtgcgggggtgttcgac
tgggatccgtccgccgcgctggtggtggagctgtcggatctgctggcggcgagtgtcgag
gagactgcatga
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