Prescottella equi: REQ_16400
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Entry
REQ_16400 CDS
T01352
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V alpha subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
req
Prescottella equi
Pathway
req03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
req00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
REQ_16400 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
req03400
]
REQ_16400 (recD)
Enzymes [BR:
req01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
REQ_16400 (recD)
DNA repair and recombination proteins [BR:
req03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
REQ_16400 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
AAA_11
Viral_helicase1
Helicase_RecD
UvrD-helicase
SH3_13
AAA_22
TraI_hel_assoc_N
AAA_24
SLFN-g3_helicase
AAA_16
UvrD_C
DO-GTPase1
Motif
Other DBs
NCBI-ProteinID:
CBH47715
UniProt:
A0A3S5Y5A6
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All DBs
Position
1712458..1714314
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AA seq
618 aa
AA seq
DB search
MIEARVAQRGKGVLREFNEAGVLEAADVHVALRLAMLGGETREPVHLATALAVRAVRSGS
VCLDLSRIREVTVDEEFQIDPAALPWPDDAVVAEGLASSPLVVGGDAGPLRPLRLVDGLL
YLDRYYRQEQTVRRILDERAHGHPTVDEDLLRAGLDELFRDFADPSRPSDAPDRQRIAAA
VAATHWTSVIAGGPGTGKTHTVARVLALLERQQPGLRIGLAAPTGKAAARLQESVREQAD
LVGLRSELPAMTLHRMLGWQRGTSRFRFNETNHLPYDVIVVDETSMVSLTMMCRLLEAVR
PEARLVLVGDPDQLTSVDAGAVLADLVARPVTGVENPVLARVVGADLSASDDPAEAALSA
SERDRLRGGVIRLSRGRRFGGAIAQLAVAVRDGDEDRTLEILRSGAADVSFVDPEDLAGL
RADVVSTSAEVTSAALAGDAAGAVRASEKHRLLCAHREGPFGASWWARNAMTWIGEAMGS
RLDPDRWYAGQPLMVTANDHEMRIYNGDTGVVVADDSDGSDGDLVAAFARGEEPYLVHLS
HLASVQTVYAMTIHRSQGSQYDVVSVILPGEESSLLTRELLYTAITRARTHVRIVGTEAA
VRAAVGRRVLRASGLRRG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaggcacgggtcgcgcagcgcggcaagggagtgctgcgggagttcaacgaggcc
ggggtgctcgaggccgccgatgtgcacgtcgcgctgcggctcgcgatgctcggcggggag
acccgcgagcccgtgcacctggcgacggcgctggcggtgcgggcggtgcgatcgggctcg
gtgtgcctggacctgagtcggattcgtgaggtgacggtcgacgaggagttccagatcgat
cccgcggcgttgccgtggccggacgacgccgtcgtggccgaggggctggcgtcgagcccc
ctcgtcgtcggcggtgacgccggtccgctgcggccgctgcggctggtggacggcctgctc
tacctggaccggtactaccggcaggaacagaccgtgcgccggatcctggacgagcgcgcg
cacgggcacccgaccgtcgacgaggacctgctgcgggccgggctggacgagttgttccgg
gacttcgcggacccgtcgcggccgtcggatgccccggaccggcagcgcatcgcggcggcc
gtcgcggcgacacactggacgtcggtgatcgcgggcgggccgggcaccggcaagacgcac
acggtggcgcgggtgctggcactgctcgagcggcagcagccggggctgcggatcgggctg
gcggcgcccaccggcaaggcggcggcgcggctgcaggagtcggtgcgcgagcaggcggac
cttgtcggtctgcggtcggagttgccggcgatgacgctgcaccggatgctcggctggcag
cgggggaccagccggttccggttcaacgagaccaaccatctgccgtacgacgtgatcgtg
gtggacgagacgtcgatggtgtcgctgacgatgatgtgtcggctgctcgaggcggtgcgg
ccggaggcgcggctggtgctggtgggtgaccccgaccagttgacgtcggtggatgccggc
gcggtgctcgccgacctggtggcgcggccggtgaccggcgtggagaacccggtgctggcg
cgggtggtgggcgcggacctgtcggcgtcggacgacccggccgaagccgcgctgagtgcg
tcggagcgggaccgcctgcggggcggggtgattcggctcagtcggggtcgtcggttcggc
ggcgcgatcgcgcagctggcggtggcggtgcgcgacggtgacgaggaccgcacgctcgag
attctgcggagcggggcggcggacgtgtcgttcgtcgacccggaggatctggccgggctg
cgcgccgatgtggtgtcgacgtcggcggaggtgacctcggccgcgctggccggggacgcg
gcgggcgcggtgcgggcgtcggagaagcatcggctgctgtgtgcgcaccgggagggcccg
ttcggggcgtcgtggtgggcgcgcaacgcgatgacgtggatcggggaggcgatgggcagc
cggctcgacccggaccgctggtatgccgggcagccgctgatggtgaccgcgaacgaccac
gagatgcggatctacaacggcgacaccggggttgtggtggccgacgattcggacggctcg
gacggcgatctggtcgcggcctttgcgcgcggcgaggagccgtatctggtgcacctgagc
catctggcgtcggtgcagacggtgtacgccatgacgattcaccgcagccagggcagccag
tacgacgtggtctcggtgatcctgccgggcgaggagtcgtcgctgctcacccgggaactg
ctctatacggccatcacccgtgcgcggacgcatgtgcggatcgtcgggaccgaggcggcc
gtgcgggctgctgtggggcgacgggtcctgcgggcgagtgggttgcggcggggctga
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