Prescottella equi: REQ_19910
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Entry
REQ_19910 CDS
T01352
Name
(GenBank) putative ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
req
Prescottella equi
Brite
KEGG Orthology (KO) [BR:
req00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
req03019
]
REQ_19910
Enzymes [BR:
req01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
REQ_19910
Messenger RNA biogenesis [BR:
req03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
REQ_19910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
AAA_30
T2SSE
SLFN-g3_helicase
NACHT
PhoH
TsaE
HA2_N
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CBH48053
UniProt:
A0A3S5Y663
LinkDB
All DBs
Position
complement(2096536..2100477)
Genome browser
AA seq
1313 aa
AA seq
DB search
MSTSPSAAEIQTDRREAKKRLGALTLRDEHRLRRRLDRAKSPSALAALNEEITAAETRIA
GRRAQVPAITYPEALPVTQRRDDIAAAIASHQVVIVAGETGSGKTTQIPKICLELGRGIR
GMIGHTQPRRLAARTVAERIAEEVGRDLGDTVGYTVRFTDQVSDSTLVKLMTDGILLAEI
QRDRMLRRYDTLIIDEAHERSLNIDFILGYLKQLLPRRPDLKVVITSATIDPERFAEHFA
VDGVPAPIVEVSGRTFPVEMRYRPLTVEVGEQTFDRDPVDAVCEAVQELSAEGDGDILVF
LSGEREIRDTADALRDRKLRGTEIVPLYARLSAAEQHKVFTPHSGRRVVLSTNVAETSLT
VPGIRYVVDPGTARISRYSVRTKVQRLPIEPISQASARQRAGRCGRVADGICIRLYSEDD
FEARPQFTEPEILRTNLASVVLQMTALGLGDIEAFPFVEKPDPRAIRDGIALLEELGAIA
AGKQPAKGDGPVPAGPQLTATGRELAQLPVDPRMARMLVEAHRNGCLHEMLVIVSALSIQ
DVRERPAEFQQAADEKHARFNVENSDFLAYLKLWEYLREQRKELSGGQFRKMCRNEFLHW
LRIREWQDLHGQLRQIARGLGWETSGSGSSQASETSIHQSLLAGLLSHIGLREGDKRDFL
GARGSRFAIFPGSGLFKKPPRWVMAAELVETSRLWARMAARIEPEWAEKLAPHLVKRTYS
EPHWSTKRACAMAYERVTLYGVPLVTERPVTYSSIDPEVSRELFIRHALVQGEWQTQHKF
FHANRALLDDVEELEHRARRRDILVDDETLFEFYDERVGAEAVSARHFDTWWKKARRENP
NLLNFTTSTVVNADSAAVLDGDYPDAWRQGDIQFPLTYQFEPGKDDDGVTARIPVALLAG
LRPVGFDWLVPGMRTELVTALIKTLPKQLRRQVVPAPDFAAAALAAVKPRSESLVHALAR
ELSRLGNCRIEPTDFDVASLPPHLRMTFAAVDDEGKVLGRDKSLTALRRALAPRVEVEVS
KATATTERKPALVWTAQTLGTLPSSVTREIGGQKVTGYPALVAEESGVAVRVLTTPSAQR
AAMQAGTRELLLKAIPTQAKSVTGGMSNIDRLALGQNPDGSFDALLEDCRACAVDELIAE
NGGPVQDPAAFEELSGKVRAQLATRVARLLRMLLPSLTEAHRLSTILDRSSGEAADDVRE
QRESLLFPGFVTELASKRLRELPRYLAAASLRLESLPGSAQRDRVGMDALDRVYAAYDRM
LSALPEERRGDDDVNEILWKIEELRVSLFAQSLGTAIPVSEKRVLKAIDAIRR
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacatcaccttctgcagccgagatccagaccgatcgccgtgaggcgaagaagcgt
ctcggtgcgctcacgctgcgcgacgagcaccggctgcgccgacgcctcgatcgcgccaag
tccccgtccgccctcgccgccctgaacgaggagatcaccgcggccgagacgcgcatcgcg
ggccgacgcgcccaggtcccggcgatcacctatcccgaggcgctgcccgtcacccaacgc
cgggacgacatcgccgccgccatcgcgtcgcaccaggtggtgatcgtcgccggcgagaca
ggctccggcaagaccacgcagatcccgaagatctgcctcgaactcggccgcggaatccgg
ggcatgatcgggcacacccagccacgccgactcgcggcccgcacggtcgccgagcggatc
gccgaggaggtgggccgtgacctgggcgacactgtcggctacaccgtccggttcaccgac
caggtctccgattccaccctggtcaaactgatgaccgacggcatcctgctcgccgagatc
cagcgcgaccgaatgctccgccgttacgacacgctcatcatcgacgaggcgcacgagcgc
agcctcaacatcgatttcatcctcggctacctcaagcaactcctcccccgccgcccggac
ctgaaggtcgtcatcacgtcggcgacgatcgatcccgagcgattcgccgaacacttcgcg
gtcgacggtgtgcccgcacccatcgtggaggtgtcgggccggacgttcccggtggagatg
cgctatcggccgctcaccgtcgaggtgggcgagcagaccttcgaccgcgatcccgtcgac
gccgtgtgcgaagcggtccaggaactgtcggccgagggcgacggcgacatcctcgtgttc
ctctccggtgagcgcgagatccgcgacaccgccgacgcgttgcgcgaccgcaagctgcgg
ggcaccgagatcgtgccgctgtacgcgcggctgtccgcggccgaacagcacaaggtgttc
accccgcacagcgggcgacgggtggtgctgtccaccaacgtcgccgagacgtcgctgacc
gtgcccggcatccgatacgtcgtcgacccgggcaccgcgcgaatctcgcgctactcggtg
cggaccaaggtgcagcgcctgcccatcgaaccgatctcgcaggcgtcggcccgccagcgc
gccggccgctgcggccgcgtcgcggacggcatttgcatccggttgtactcggaggacgac
ttcgaggcacgtccccagttcaccgaaccggagatcctgcgcaccaacctcgcgtccgtc
gtgctgcagatgaccgcgctcgggctcggcgacatcgaggcgttcccgttcgtggagaag
cccgacccgcgcgcgatccgcgacggcatcgcactgctcgaggaactgggtgcgatcgcg
gccggcaagcagcccgcgaagggtgacggaccggtcccggccggcccgcagctcaccgcc
accggccgcgaactcgcccagctcccggtcgatccgcggatggcccggatgctcgtcgag
gcgcaccgcaacgggtgcctgcacgagatgctggtcatcgtctcggcactgtcgatccag
gacgtccgggaacgccccgccgagttccagcaggccgccgacgagaagcatgcgcgcttc
aacgtggagaactccgacttcctggcctacctgaagctgtgggagtacctgcgcgagcag
cggaaggagctgagcgggggccagttccgcaagatgtgtcgcaacgagttcctgcactgg
ttgcgtatccgcgaatggcaggacctgcacggccagctccgtcagatcgcccgcggcctc
ggctgggagacatccggttccggctcctcgcaggcgtcggagacgtcgatccaccagtcg
ctgctggcgggactgctctcgcacatcggtctgcgtgagggcgacaagcgtgacttcctc
ggcgcccgtggcagccggttcgcgatcttccccggatctggcctgttcaagaagccgcca
cgctgggtgatggccgccgaactcgtcgagacgtcacgattgtgggccaggatggccgcc
cggatcgagcccgaatgggcggagaagctggccccccacctggtcaagcgcacctactcg
gagccgcactggtccaccaaacgcgcctgcgcgatggcctacgagcgggtcaccctctac
ggcgtccccctcgtcaccgagcgcccggtcacgtacagctcgatcgatcctgaggtgtcg
cgcgagctgttcatccgccacgcgctggtgcagggcgagtggcagacgcagcacaagttc
ttccacgccaaccgggcgctgctcgacgacgtcgaggaactcgaacaccgtgcccgacgc
cgtgacatcctcgtcgacgacgagacgctgttcgagttctacgacgagcgggtcggcgcg
gaggccgtgtccgccaggcacttcgacacgtggtggaagaaggcccgccgcgagaacccg
aatctgctcaacttcaccacgtccacggtcgtcaacgccgattccgccgcagtcctcgac
ggtgactacccggacgcctggcgtcagggcgacatccagttcccgctgacctaccagttc
gagcccggcaaggacgacgacggcgtgacggcgcggattccggtcgccctgctcgcgggt
ctgcggccggtgggcttcgactggctcgtgccgggtatgcgcaccgaactcgtcaccgcg
ctgatcaagacactgcccaaacagcttcgccgacaggtggttccggcgccggacttcgct
gcggccgcactcgccgcggtgaagccccgctcggagtccctcgtgcacgccctggcgcgg
gaactctcccgcctggggaactgccggatcgaacccaccgacttcgacgtcgcttcgctg
ccgccgcatctgcggatgacgtttgcggcagtcgacgacgagggcaaggtcctcgggcgg
gacaagagcctgaccgcgctgcgccgcgcgctggcaccccgagtcgaggtggaggtgtcg
aaggcgaccgcgacgacggaacgcaagcccgcgctggtgtggacggcgcagacgctgggc
accctgccctcgtcggtgacccgcgagatcggtggccagaaggtcaccggatatccggcg
ctggtggccgaggaatccggggtcgcggtacgggtcctcacaacgccgagcgcgcagcgc
gcggcgatgcaggccggtacccgagagttgctgctgaaggcgattccgacgcaggccaag
tcggtgacgggtggcatgagcaacatcgaccgactcgccctcgggcagaacccggacggc
agcttcgacgcactgctcgaggactgccgcgcctgcgcggtcgacgagctgatcgccgag
aacggcggacctgttcaggaccccgccgcattcgaggaactcagcggcaaggtgcgcgcc
cagttggccacccgggtcgcgcggctacttcgaatgctcctcccgtcgctcaccgaggct
catcgactgtcgacgatcctcgatcgcagttccggggaggcggccgacgacgtacgcgag
caacgggaatcgctgctgttccccgggttcgtcacggagttggcgtccaagcgactgcgc
gagctgccgcggtacctcgcggcagcgtcgttgcgcctcgagtccctgccgggcagcgcc
cagcgggaccgcgtcgggatggacgcgctcgaccgcgtctatgcggcgtacgaccggatg
ctgtcggcgttgcccgaggaacgccgcggcgacgacgacgtcaacgagatcctctggaag
atcgaggaactgcgcgtgagcctgttcgcccagtccctgggcactgcgataccggtctcc
gagaagcgggtcctcaaagcgatcgacgccatccggcgctga
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