Prescottella equi: REQ_29850
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Entry
REQ_29850 CDS
T01352
Name
(GenBank) putative ribonuclease E and G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
req
Prescottella equi
Pathway
req03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
req00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
REQ_29850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
req03019
]
REQ_29850
03009 Ribosome biogenesis [BR:
req03009
]
REQ_29850
Enzymes [BR:
req01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
REQ_29850
Messenger RNA biogenesis [BR:
req03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
REQ_29850
Ribosome biogenesis [BR:
req03009
]
Prokaryotic type
rRNA processing factors
REQ_29850
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
DUF8067
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
CBH49001
UniProt:
A0A3S5Y8Y5
LinkDB
All DBs
Position
complement(3165509..3168982)
Genome browser
AA seq
1157 aa
AA seq
DB search
MRRGSPPSSQAPRDSAVITDTVEYVERDQTISCPRYEYTTIAPARPRHIRQTDGWTRPGA
RGEYVADQAPPENVQEPIVEASVQAGATPALPEKIRAHALAKLLGVTSKQVLAEAAALGT
ELRSAQSSLTREIAERIHATVTGAAAGAEQVTEPAAAPVAATEPEAAEPEAAEQVATEET
PPAEKPAPRKRARKKAAPKAEKPAESAPSPTTAEESAETSSVGETLFTDAEPAAEKEEAA
APAVVQAPLFLQPDAAAAEPAPRRRRSRRAAAAPEVTEESQPEKVASAAEPAADKASAEA
TDTEATADSSESSESSASSDAGESNDTESGDQQRRRRRGRRGRGRGRGEQHAEGETEDTD
KTEETASEAAESTGKNADDTAAEAGTESAEASEGEASESDDEGDGSSRRRRRRRRRRGGA
DGEVASEDDPPNTVVHEREPRNKPRTKDEVQGISGSTRLEAKRQRRRDGRDAGRRRPPIL
SESEFLARREAVDRVMVVREKVGGANPAASTQVAVLEDGVLVEHFVTGSSSTSMVGNVYL
GRVQNVLPSMEAAFIDIGRGRNGVLYAGEVNWEAAGLGGRERKIEQALKPGDQVLVQVSK
DPVGHKGARLTTQISLAGRFLVYVPGGTSTGISRKLPDTERKRLKEILREIVPADAGVII
RTASEGVSEEELSRDVTRLQTQWATIEEQAAKAKDGKSGSPQALYEEPDLLVKVVRDLFN
EDFSKLVIEGEKAWNTVETYIKTVAPDLLPRVERHDPAPGTPDVFETHRIDEQLAKALDR
KVWLPSGGTLVIDRTEAMTVVDVNTGKFTGAGGNLEETVTRNNLEAAEEIVRQMRLRDIG
GMIVIDFIDMVLESNRDLVLRRLTESLGRDRTRHQVSEVTSLGLVQVTRKKLGTGLVEAF
STTCEHCHGRGIIVHTEPVETKSSDDGGRGQGQGKESGGGGRKKRGRDRAAAATPAPTPE
PESNGQHAHPSAEEAAADATVKRAHPVALAMASHHPDHDPSGGPAAEEAAPAAEEAAPAA
EDATQTSPADVAQPDTVETPRTEPEATPEPQATAEPTSESAPEPEAAPRRRRSRRVSRAA
AAPAADSSESGTVFVMSATEPAPTAEAPAASEPAPEAAEGTSSPDGQAPAEPAVAPRKPR
RRRAAARPAGPPVDADA
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgtggatcgccgccatccagccaggcaccgcgcgattctgcagtgataacggac
actgtggagtacgtggagcgagaccagacaatctcgtgcccgaggtacgagtacacaacc
atcgcccccgcgcggccgcgtcacattcgacagacagacggatggacgcgcccgggggct
cgaggagaatacgtggccgatcaagcgccgcccgaaaacgtgcaggaaccgatcgtggaa
gcgtcggtccaagcgggtgccaccccggcactgcccgagaagatccgcgcccacgcgttg
gccaagcttctcggtgtgacgagcaagcaggtcctcgccgaggccgccgcactcggcacc
gagctgcgcagcgcgcagtcgagtctgacccgtgagatcgcggagcgtatccacgccacc
gtgacgggagctgctgccggggccgagcaggtgaccgaaccggccgcggccccggtcgcc
gccaccgagccagaagccgccgagccagaagccgccgagcaggtagccaccgaggagacc
ccgccggccgagaagccggcgccccgtaagcgggcccgcaagaaggctgcccccaaggcc
gagaagccggccgagtccgccccgtcgcccacgacggcggaggagtcggcagagacctcc
agcgtgggcgaaacgctcttcacggacgccgagcccgccgccgagaaggaagaggccgcc
gccccggcggtagtgcaggcaccgttgttcctgcagcccgacgccgcggccgcggagcct
gctccgcgtcgtcggcgcagccgtcgggccgcggcagcccccgaggtgaccgaggagtcg
cagccggagaaggtggcgtccgccgcggagcccgccgccgacaaggcttcggccgaggcg
accgacaccgaggccaccgcagactcctccgagtcgtcggagtcgtccgcctcgtccgac
gccggggagtcgaacgataccgagagtggcgatcagcagcgtcgccgtcgccggggccgt
cgcggccgcggccgtgggcgcggcgagcagcacgccgagggcgagaccgaggacaccgac
aagaccgaggagaccgcctcggaagccgccgaatcgaccggcaagaacgccgacgacacg
gcagccgaggccggtaccgagagtgccgaggcatccgagggcgaggcgtcggagtccgac
gacgagggtgacggctcgagccgccgtcggcgccgtcgtcgtcgccgtcgcggcggtgcc
gacggtgaggtcgcctccgaggacgatccgccgaacaccgtcgtgcacgagcgtgagccg
cgaaacaagccgcggaccaaggacgaggtgcaggggatcagcggatccacccgactcgag
gcgaagcgtcagcgtcgccgcgacggtcgggacgccggacgtcgtcgcccgccgatcctg
agcgagtcggagttcctggcccgccgcgaggcggtcgaccgggtcatggtcgtccgcgag
aaggtcggtggtgccaacccggcagcgtcgacgcaggtcgcggtcctcgaggacggcgtg
ctcgtggagcacttcgtcaccgggtcgtcctccacgtcgatggtcggaaacgtctacctg
ggtcgcgtccagaacgtgctgcccagcatggaggccgccttcatcgacatcggccgcgga
cgcaacggcgtcctgtacgcgggcgaggtcaactgggaggccgccggtctcggtgggcgc
gagcgcaagatcgagcaggcgctcaagcccggcgatcaggtactggtgcaggtcagcaag
gacccggtggggcacaagggcgcccgcctgaccacccagatcagcctggccggacggttc
ctcgtgtacgtgcccggcggaacgtccaccggcatcagccgaaagctgcccgacaccgag
cgcaagcgtctcaaggagattctccgcgagatcgtgccggccgacgccggtgtgatcatc
cggacggcgtccgagggcgtcagcgaggaggaactgtcccgcgacgtcacccgtctgcag
acgcagtgggcgacgatcgaggagcaggccgcgaaggcgaaggacggcaagtccggttcg
ccgcaggcgctgtacgaggagcccgacctcctcgtcaaggttgtgcgtgacctgttcaac
gaggacttctcgaagctcgtgatcgagggcgagaaggcctggaacaccgtcgagacctac
atcaagacggtggcgccggacctgctgccgcgcgtcgagcggcacgatcccgcgccgggc
accccggacgtcttcgagacccaccgcatcgacgagcagctcgcgaaggcactcgatcgg
aaagtctggctgccttccggtggcacgctggtgatcgaccgcaccgaggcgatgaccgtg
gtcgacgtcaacaccggcaagttcaccggtgccggcggcaacctcgaggagaccgtcacg
cggaacaacctcgaggctgccgaggagatcgtgcggcagatgcgcctgcgcgacatcggc
ggcatgatcgtcatcgacttcatcgacatggtgctcgagtcgaaccgcgatctggtgctg
cgccgactcaccgagtcgctgggccgggaccgcacccgccaccaggtgtccgaggtgacg
tcgctgggcctggtccaggtcacgcgcaagaagctcggcaccgggctggtcgaggctttc
tcgaccacgtgcgagcactgccacgggcgcggcatcatcgtccacaccgagccggtggag
acgaagtcgtccgacgacggtggccgcggccagggtcagggcaaggagtcgggcggtggt
ggccgcaagaagcgtggccgcgatcgcgcggcggcggcgacgccggcaccgacgcccgaa
ccggagtccaacggtcagcacgcgcacccgtccgccgaggaggcggccgccgacgcgacc
gtcaagcgcgcccacccggtcgcgctcgcgatggcgtcgcaccaccccgaccacgatccg
tccggcgggccggcggccgaggaagcagcgccggcggccgaggaagcagcgccggcggcc
gaggacgccacgcagacctcgccggccgacgtcgcgcagccggacacggtcgagacgccg
cggacggagccggaggcaacacccgagccgcaggcgacggcggaaccgacgtccgagtcc
gcacccgaaccggaggcggcgccgcgccgtcgacggagccgacgggtctcccgcgcggcg
gccgcaccggcggcggacagctccgagtcggggacggtgttcgtgatgtccgccacggag
cccgctccgacggccgaagccccggcggcatccgagccggcgcccgaggcagcggagggc
acgtcgtcgcccgatggccaggctcccgccgagcctgcagtcgctccacgcaagccgcgt
cgtcgccgtgccgccgcacgtcccgccggtcctccggtggacgccgacgcctga
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