Prescottella equi: REQ_31340
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Entry
REQ_31340 CDS
T01352
Symbol
hupB
Name
(GenBank) histone-like bacterial DNA-binding protein HupB
KO
K03530
DNA-binding protein HU-beta
Organism
req
Prescottella equi
Brite
KEGG Orthology (KO) [BR:
req00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
req03032
]
REQ_31340 (hupB)
03036 Chromosome and associated proteins [BR:
req03036
]
REQ_31340 (hupB)
03400 DNA repair and recombination proteins [BR:
req03400
]
REQ_31340 (hupB)
DNA replication proteins [BR:
req03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
REQ_31340 (hupB)
Chromosome and associated proteins [BR:
req03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
REQ_31340 (hupB)
DNA repair and recombination proteins [BR:
req03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
REQ_31340 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
CBH49137
UniProt:
A0A3S5Y981
LinkDB
All DBs
Position
complement(3333996..3334724)
Genome browser
AA seq
242 aa
AA seq
DB search
MNKAELIDVLTEKLGTDRRTASEAVEHVVDTIVRAVHAGESVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKALIAGGQKLPSSGPAVKRGAAEPVKKAAKKTAAK
KTAAKKTAAKKTAAKAPAKTVAKKTAAKAPAKTVAKKTAAKAPAKTAAKKTAAKAPAKTA
AKKTVAKKTATKAPAKAPAKTAAKKTVAKKTAAKAPAKTAAKKTVAKKTAAKKAPAKRTA
RK
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagagctcatcgatgttctgaccgagaagctgggcacggacaggcgcacc
gcgagtgaggccgtcgagcacgtggtcgacaccatcgtgcgtgcagtccatgccggcgag
agcgtcaccatcaccggtttcggtgtcttcgagcagcgccgtcgcgcggctcgcgtcgct
cgcaacccgcgcacgggcgagacggtcaaggtcaagccgacgtcggttccggcgttccgt
ccgggcgcacagttcaaggcgctcatcgccggtgggcagaagctccccagcagcggaccg
gccgtcaagcgtggcgccgctgagcccgtgaagaaggccgccaagaagacggctgccaag
aagaccgccgccaagaagacggctgcgaagaagactgcggccaaggctcctgccaagacc
gtggcgaagaagactgcggccaaggctcctgccaagaccgtggcgaagaagactgcggcc
aaggctcctgccaagaccgcagccaagaagaccgcggccaaggctccggccaagaccgca
gccaagaagaccgtcgcgaagaagaccgcgaccaaggccccggccaaggctccggccaag
accgcagccaagaagacggtcgcgaagaagactgcagccaaggctcccgccaagaccgca
gccaagaagaccgtcgcgaagaagactgcagccaagaaggctccggccaagcgcaccgca
cgtaagtaa
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integrated database retrieval system
