Rhodococcus erythropolis PR4: RER_02210
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Entry
RER_02210 CDS
T00881
Symbol
pks13
Name
(GenBank) probable polyketide synthase Pks13
KO
K12437
polyketide synthase 13
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer00074
Mycolic acid biosynthesis
rer01100
Metabolic pathways
rer01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09100 Metabolism
09103 Lipid metabolism
00074 Mycolic acid biosynthesis
RER_02210 (pks13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rer01004
]
RER_02210 (pks13)
Lipid biosynthesis proteins [BR:
rer01004
]
Polyketide synthase
Modular PKS
RER_02210 (pks13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
ACP_SdgA_C
RhiE-like_linker
Thiolase_N
CurL-like_PKS_C
EAD2
Motif
Other DBs
NCBI-ProteinID:
BAH30929
UniProt:
C0ZLV2
LinkDB
All DBs
Position
253553..258496
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AA seq
1647 aa
AA seq
DB search
MVEQDGVQSKDVVSEMSVAQLREWLRNWIADATGQPVSTIVDDRPLDEFGLASRDAVALS
GDIEDLLGVTLTATIVYQHPTIASLATRIIEGEPEAPEETVDASYYVSGATTDAHDIAIV
GLSTRFPGAGHTPSDMWEMLAAGRDGISDLPEDRWAEFMSDPAIKAAVENANTKGGYLDD
VKGFDAEFFAMSPLEVVNVDPQQRLALELAWEALEHARIPASGLKGKQVGVFIGSSANDY
QLLAVSDPTTAHPYALTGTSTAIVANRVSYFFDFRGPSIALDTACSSSLVAVHEAVRSLR
SGDSNIALAGGVNMLLAPPGTLGFDQTGMLAPDGKLRAFSAHAQGIVRSEGGGLVVLKRL
EDAERDGDSILAVIAGSAVNQDGRSNGLLAPNPDAQADVLRFAYRDAGIVPTTVDYIEAH
GTGTDLGDPIEADALSRVVGRGRDDDKPALLGSAKTNFGHLEAAAGAAGLIKVVLAMQEN
KIPATINYLGPNPHIDFEKAHLQVTPEATDWPRYTGKAVAGVSGFGFGGTNAHVVVKEYV
PADVAVDEPVVDAPVADEPAAEDESTVVLAVSGALPSRRRRAAADLADWLETEEGSKTPL
ADVARTLARRNHGRSRAAVLAKTRSEAISSLRAVAAGKPAQGVFSADSPSPKGAVWVFSG
FGSQHRKMAKQLYTENAAFKAAVDEVDALIQDEAGYSMVEMFLDDAIEYNVETAQVGIFT
IQVGLAALLRHHGAEAEAVVPHSMGEAAAAYVSGGLNLEDAVRVICSRSRLMGEAEGALV
GDDIRLMALLEYSASEIEALLPTYPKLEVCVYAAPTHTVIGGPQPDIEAIVAAAEADGKM
ARVLQTKGASHTSQVDPLLGELAAELAGIEPTTLKLGVYSSVDKDTFYRPGHEPIHQEAY
WVKGLRHSVYFTNAVRGAVAHGHTTFVELAPNPVTLMSVAATAFDSGLHDMELIQTLKRK
EDESAGVLAALAQLYVHGHAVNLESLLPAGDFASVPRTAFLRKPYWLDIRVSAGGSARVP
GSHVALPDGRHVWEVDASAVTDLAVLVSAAAGQVLSDVALTAAVPHGELAGAATLTTTLN
PHPGGASVQVHAREGSTFRLLFDAVVTSGEPLPELVISAPVKTSAPMETLAEVVEDAGDK
WDPNGSQSLDDRLKIVVAESMGYSPEDLPAEVPLIELGLDSLMAMRIKNRVEYEFDIPQL
QLQAVKDASLNEVNKYLRYAIDNREEVQAMADKQAAEKLAADAADEDAAPAEESVELPAT
APVAAAPSDPSRAGTADDAGSDVPPRDAAERLTFATWAVVTGKSAKGIFNDLPIVGDEVA
EKLAARLSERAGGEITLDDVLDSTTIEELADVVRQYLEDDGKIDGLVRTLRARPEGSTAV
PVFVFHAAGGSTVTYEPLLKRLPAGTPMYGFERVEGSIETRAAAYVPLLREIQGDGPYVL
CGWSFGGVMSYAVAKLLREQGADVRVVGLLDTVMAGEVVPDTEAERRKRWERYGKFAKRT
YNLDVPLPLDVLASTEADEDQIQILMDMIKMSGAKIPGGIIEHQRTSWLDNRAIQTAEFS
SYDGDVVLYMADKYHDELMTLEPAFKTRKADGGWGDYVKNLEVVYIGGDHLQIVDEPYIA
KVAADLTTKLAQIETAQTKAAETGVQK
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atggttgaacaagatggtgtgcagagcaaagacgttgtgagcgagatgagtgtcgcgcag
ttgcgtgagtggcttcgcaactggatcgccgacgcgaccggtcagccggtgtcgacgatt
gtggacgaccggccgctggacgagttcggactcgcctcgcgggacgcagttgctctgagc
ggagacatcgaggatctgctcggtgtcacgctgaccgccacgatcgtctaccaacacccc
accatcgcctcgctggctactcggatcatcgaaggtgagcccgaggcgccggaggagacc
gtcgacgcgtcgtactacgtctcaggcgccacgacggacgcccacgacatcgccatcgtc
ggactgtccacacgattccccggtgccgggcacacgccttcggacatgtgggaaatgctg
gcggccggacgcgacggcatcagcgacctccccgaggaccgctgggccgagttcatgtcg
gatcccgccatcaaggccgcggtcgagaacgccaacaccaagggcgggtacctcgacgac
gtcaagggcttcgacgccgagttcttcgcgatgtctccgctcgaggtcgtcaacgtcgat
ccgcagcagcgcctcgccctggaactcgcgtgggaagcgctcgagcatgcgcgcattccg
gccagcgggctcaagggcaagcaggtcggtgttttcatcggcagttccgccaacgattac
cagttgctcgcggtcagtgatccgacgacggcgcacccgtacgcactgaccggaacgtcg
acggccatcgtcgcgaaccgggtttcgtacttcttcgacttccgtggaccgtccatcgct
ctggacaccgcgtgctcgtcttcgctggttgccgttcacgaggctgtgcgttcgctgcgc
agtggtgattccaacatcgcgctggccggtggcgtcaacatgctgctggcccctcccgga
accctcggtttcgatcagaccgggatgctcgctcccgacggaaaactgcgtgcattttcc
gcacacgctcagggcatcgttcgcagtgagggtggcggactcgtcgtgctcaagcgtctc
gaagacgccgagcgtgacggcgattccatcctcgcggtgatcgccggatccgcggtcaac
caggacggccgttccaacggtctgctcgcgcccaacccggacgcccaggccgacgtgttg
cgtttcgcgtaccgcgacgccggcatcgtgccgaccacagtcgactacatcgaggcgcac
ggaacgggcaccgatctcggtgatcccatcgaggccgacgcgctcagtcgtgtcgtcggt
cgtggccgtgacgacgacaagccagctctgctcggtagtgcgaagaccaacttcgggcac
ctggaagcagctgcgggcgctgccggcctgatcaaggtcgttctggcgatgcaggaaaac
aagattcccgcgacgatcaactacctgggcccgaacccgcacatcgacttcgagaaggcg
cacctgcaggtgacgcccgaggccaccgactggccgcgctacaccggcaaggccgtcgcc
ggcgtttccggtttcggtttcggcggaaccaacgcgcacgtcgtggtcaaggaatacgtg
cctgccgacgtggcagtcgatgaaccagtcgtggatgccccggtagctgacgaaccggca
gcagaggacgagagcaccgttgtgctggctgtgtccggtgcgctgccttcgcgtcgtcgc
cgcgcagctgcagatctggccgactggctcgaaaccgaagagggaagcaagacgcccctc
gccgacgtcgcccgcacactcgcgcgtcgcaaccacggacgctcgcgcgccgctgttctg
gcgaagacgcggtccgaggccatcagctcgctgcgcgccgtcgccgcaggcaagccggct
caaggagtcttctcggccgactcgccgtcgcccaagggcgcggtgtgggtgttctcgggc
ttcggctcgcagcaccgcaagatggccaagcagctctacacggagaacgcggctttcaag
gcagccgtcgacgaggtcgatgcgctgatccaggacgaggccggctactcgatggtcgag
atgttcctcgacgatgcgatcgagtacaacgtcgagaccgcacaggtgggaatcttcacc
atccaggtcggtctggccgcattgctgcgtcaccacggcgctgaagccgaagccgtggtt
ccgcactcgatgggtgaggccgctgccgcatacgtgtccggtggtctgaacttagaagac
gctgtgcgcgtgatctgttcacgttcacggctgatgggtgaggccgagggcgcactcgtc
ggcgacgacatccgtctgatggcactgctcgagtacagcgcatccgagatcgaggcgctg
ctgcccacgtatcccaagctcgaggtctgcgtttacgcagctccgacgcacacggtgatc
ggtggaccgcagccggacatcgaggcgatcgtcgcggccgccgaggccgacggcaagatg
gcgcgtgtcctgcagaccaagggtgccagccatacttcacaggtggatccgctgctcggc
gagcttgccgcggagttggccggtatcgagccgaccacgttgaagctcggcgtctactcg
tccgtcgacaaggacaccttctaccgtcccggtcacgagccgatccatcaagaggcgtac
tgggtcaagggccttcgccacagcgtgtacttcaccaatgcggtacgcggtgcagttgcc
cacggccacaccacttttgtcgagcttgcacccaacccggtgacgctgatgtcggtggcg
gctaccgcgttcgattcgggcctgcacgacatggaactcatccagacgctcaagcgtaag
gaagacgagtccgcgggtgtgcttgccgctctcgcgcagctgtacgtgcacggccatgcc
gtgaacctcgagtccttgcttcctgcaggcgatttcgcctcggttccgcgtactgcattc
ctgcgtaagccgtactggctcgacattcgcgtcagtgccggcggttcggctcgcgtaccc
ggttcgcacgtcgctctgcccgacggccgccacgtgtgggaggtcgacgcatccgccgtc
accgatctggctgtgctcgtgagcgctgctgccggacaggtgctctcggatgtcgctctc
accgctgccgttccgcacggtgaactggccggcgctgcgaccctgacgacaaccctcaac
ccgcatccgggtggagcgtcggtgcaggtgcacgcacgcgagggctctacgttccgtttg
ctgttcgatgccgtcgtcacgtccggtgagccgctgcccgagctggtcattagcgcgccg
gtcaagaccagtgcgccgatggaaaccctggccgaggtcgtcgaagacgccggagacaag
tgggatccgaacggttcgcagagcctcgacgaccgcctcaagatcgttgtggccgagtcg
atggggtactcgccggaagatcttccggccgaggttccgctcatcgaactgggtctcgat
tcgctcatggcgatgcgtatcaagaaccgcgtcgagtacgagttcgacattccgcagctc
cagctccaggcagtcaaggacgcgagcctcaacgaggtcaacaagtacctgcgctacgcg
atcgacaatcgcgaagaggttcaggcgatggccgacaagcaggctgccgagaagttggca
gccgatgcggctgacgaggacgctgctcccgctgaggagtcggtggaactgccggcgact
gctccggttgctgctgcgccttccgatccttctcgagccggaactgccgacgatgccggc
tccgacgttccgccgcgagatgcggccgagcgcttgacgtttgcgacgtgggccgtcgtc
accgggaagtccgccaagggtattttcaacgatctgccgatcgtcggtgacgaggtcgcc
gagaagcttgctgctcggctttccgagcgtgcgggcggcgagatcactctcgacgacgtt
ctcgattccaccaccatcgaagagctcgcggacgtcgtgcgccagtacctcgaggacgac
ggcaagatcgacggactcgtgcgcactctgcgtgcccgtcccgaaggttccactgccgta
ccggtattcgtcttccatgctgccggtggttcgaccgtgacgtacgagcctttgctcaag
cgcctgcccgccggcacgccgatgtacgggttcgagcgggtcgagggctcgatcgaaacc
cgtgctgctgcttacgttccgctgctgcgtgagatccagggcgacggaccgtacgtgctg
tgtggctggtcgttcggcggcgtgatgtcgtatgcggtcgcgaagttgctgcgtgagcag
ggcgctgacgtgcgtgtggtcggactgctcgacaccgtcatggccggcgaggtcgtgccg
gacaccgaggcggaacgacgcaagcgttgggagcgctacggcaagttcgccaagcgcacc
tacaacctggatgttccgctgccgcttgacgttctggcctccaccgaagcggacgaagat
cagatccagatcttgatggacatgatcaagatgagcggcgccaagattcccggcggcatc
atcgagcatcagcggacgtcgtggttggacaaccgtgccatccagacggccgagttcagc
agctacgacggcgacgtcgtgctctacatggccgacaagtaccacgacgagttgatgacg
ctcgagcctgcattcaagacccgcaaggcagatggtggttggggtgactacgtgaagaac
ctcgaggtcgtctacatcggcggggaccacctgcagatcgtcgacgagccgtacatcgcg
aaggttgcggcagacctcaccaccaagctggcccagatcgagacagctcagaccaaagca
gcggaaaccggagttcagaagtga
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