Rhodococcus erythropolis PR4: RER_03260
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Entry
RER_03260 CDS
T00881
Name
(GenBank) putative modification methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer00270
Cysteine and methionine metabolism
rer01100
Metabolic pathways
Module
rer_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RER_03260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rer03000
]
RER_03260
03032 DNA replication proteins [BR:
rer03032
]
RER_03260
03036 Chromosome and associated proteins [BR:
rer03036
]
RER_03260
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
rer02048
]
RER_03260
Enzymes [BR:
rer01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
RER_03260
Transcription factors [BR:
rer03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
RER_03260
DNA replication proteins [BR:
rer03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
RER_03260
Chromosome and associated proteins [BR:
rer03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
RER_03260
Prokaryotic defense system [BR:
rer02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
RER_03260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
BAH31034
UniProt:
C0ZM57
LinkDB
All DBs
Position
complement(366985..368163)
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AA seq
392 aa
AA seq
DB search
MRKGAVTSSRSMVGLFAGIGGLELGLSEHGWNTELLCEIDPGAQAVLRSRFADVPLHGDV
TKLRALPSDIELVAAGFPCQDLSQAGKTAGITGARSGLVDEVFRLVKRKKGPRWLLIENV
PFMLQLGKGAAMRHITDALEDLGYTWAYRVVDARAFGLPQRRQRVIMLASRTDDPREILF
GQDAGERLGGDPADYPCGFYWTEGTRGLGWAVNAVPTLKGGSSVGIPSQPAVRLPSGEIV
TPGLVDAERLQGFDPDWTLPSVEVPGLRHSHRWKLVGNAVSVRMASWVGGRLNDPIAYDA
AGETPLEPGDAWPSAAWGRNRQAFRVHTSTWPVQYDYEDLSGFLEDTRLLSARATAGFLK
RARMGNLRFIPGFIEDVESHLERMGGYPEAAA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
gtgaggaagggtgctgtgacgtcgtcgcggagcatggtgggtttgtttgccggtatcggc
gggctcgagttggggctctcggaacatgggtggaacaccgaactgctgtgtgaaatcgat
ccgggcgcccaggcagttctccgttcgcgattcgccgacgtgccgttgcacggcgacgtc
accaaactgcgcgcgctgcccagtgacatcgaattggtggccgccggtttcccctgccag
gacctctctcaagccggcaaaacagcaggcatcaccggcgcacgctcgggactggtggac
gaggtgttccgtctggtcaagcgcaagaaaggcccgcgctggctgttgatcgagaacgtt
ccgttcatgctgcaactcggcaagggcgctgccatgcggcacatcaccgacgctctcgaa
gacctcggatacacctgggcataccgggtggtggacgcccgcgccttcggactcccccag
cgccgtcagcgcgtcatcatgcttgcctcgcgcacggacgatcctcgcgaaatcctgttc
ggccaggacgccggcgagcgcctgggaggtgatcccgcggactacccctgcggcttttac
tggaccgaaggcacccgcggactcggatgggccgtcaatgccgtgccgacgctcaagggc
ggctcgtccgtcggcatccccagccagccggcggtccggttgccgtccggtgagatcgtc
actcccggcctcgtcgacgccgaacgcctgcagggtttcgatcccgactggacgcttccg
tccgtcgaggttcccggcctacgccacagccaccgatggaagctcgtcggcaatgccgtg
agcgtgcggatggcgtcgtgggtcggtggccggctgaacgatcccatcgcatacgacgcc
gcgggcgagacgccactcgaaccgggcgacgcgtggccgagtgcggcatggggccgtaac
cgccaagccttccgcgtccacacctcgacctggccggtccagtacgactacgaggatctg
agtggcttcctcgaggacacgcggttgctgtcggcgcgggccacagccggcttcctcaag
cgcgcacgcatgggcaatcttcggttcatccccggtttcatcgaggacgtcgaaagccat
ctcgagcggatgggcggataccccgaggccgcggcatga
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