Rhodococcus erythropolis PR4: RER_03810
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Entry
RER_03810 CDS
T00881
Symbol
fadB
Name
(GenBank) fatty oxidation complex alpha subunit
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer00071
Fatty acid degradation
rer00280
Valine, leucine and isoleucine degradation
rer00310
Lysine degradation
rer00362
Benzoate degradation
rer00380
Tryptophan metabolism
rer00410
beta-Alanine metabolism
rer00640
Propanoate metabolism
rer00650
Butanoate metabolism
rer00907
Pinene, camphor and geraniol degradation
rer00930
Caprolactam degradation
rer01100
Metabolic pathways
rer01110
Biosynthesis of secondary metabolites
rer01120
Microbial metabolism in diverse environments
rer01200
Carbon metabolism
rer01212
Fatty acid metabolism
Module
rer_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RER_03810 (fadB)
00650 Butanoate metabolism
RER_03810 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
RER_03810 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RER_03810 (fadB)
00310 Lysine degradation
RER_03810 (fadB)
00380 Tryptophan metabolism
RER_03810 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RER_03810 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RER_03810 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RER_03810 (fadB)
00930 Caprolactam degradation
RER_03810 (fadB)
Enzymes [BR:
rer01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RER_03810 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RER_03810 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RER_03810 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
DAO
F420_oxidored
AlaDh_PNT_C
UDPG_MGDP_dh_N
2-Hacid_dh_C
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
BAH31089
UniProt:
C0ZN37
LinkDB
All DBs
Position
429759..431900
Genome browser
AA seq
713 aa
AA seq
DB search
MTDQNIINWDQDADGIVVLTINDPNQGANTMNDAYIASMKATVDRLVAEKDSITGAVITS
GKKTFFAGGDLKNMIKVGPEQAEEIYNHSVEIKADLRRLETLGKPVVAAINGAALGGGLE
IALATHHRIAADVKGVKIGLPEVTLGLLPGGGGVVRTVRMLGLQNALMGVLLQGQQRGPV
QAKEVGLIDEVVGSVEELVPAAKAWIKANPEGGVQPWDVKGYKIPGGTPSTPAFAANLPA
FPANLRKQLKGAPMPAPRAIMAAAVEGSQVDIDNALLIEARYFTSLVTGRVAKNMIQAFF
FDLQSINGGGSRPAGIEKSTIKKVGVLGAGMMGAGIAYVSAKAGFDVVLKDVSIEAANKG
KAYAEGIEAKALSRGKTTQEKSDALLAKITPTADPADFAGVDFVIEAVFESQELKHKVFQ
EIEDIVDPKALLGSNTSTLPITGLATGVKRQEDFIGIHFFSPVDKMPLVEIIRGEKTSDE
TLARVFDYVQAIRKTPIVVNDSRGFFTSRVIGTFINEAIGMLAEGVEPATIEQAGMQAGY
PAAPLQLSDELNLTLMQKIRKESADAAKAEGKELPADPAGEVINTLVEKFDRKGKLGGAG
FYDYAEGKRTGLWSGLRENFNSGTSDAPIQDLIDRMLFIEAIETQKCFDENVLITTADAN
IGSIMGIGFPAWTGGVHQFIVGYEGGTAGFVARAKELAAQYGPRFTPPASLGA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatcagaacatcatcaactgggaccaggacgccgacggcatcgtcgtgctcacc
atcaacgatcccaaccagggcgcaaacaccatgaacgacgcgtacatcgcgtcgatgaag
gccaccgtcgaccgcctggtcgccgagaaggactccatcaccggtgccgtcatcacctca
ggcaagaagaccttcttcgccggtggcgacctcaagaacatgatcaaggtcggccccgag
caggccgaggagatctacaaccacagcgtcgagatcaaggcagacctgcgtcgcctcgaa
actctcggcaagccggtagtcgccgccatcaacggcgcggccctcggcggcggcctcgag
atcgctctcgcgacccaccaccgcatcgcggcagacgtcaagggcgtcaagatcggcctg
cccgaggtcaccctcggcctgctgcccggcggcggcggcgtcgtgcgcaccgtgcggatg
ctcggtctgcagaacgcgctcatgggcgtcctgctccaggggcagcagcgtggacccgtt
caggccaaggaagtcggcctcatcgacgaggtcgtcggctcggtagaagaactggttccg
gctgcgaaggcatggatcaaggccaaccccgaaggcggcgttcagccgtgggatgtcaag
ggctacaagatccctggcggaaccccgtccaccccggcattcgctgccaaccttccggcg
ttccccgcgaacctgcgtaagcagctcaagggtgctccgatgccggctccgcgcgccatc
atggccgcagccgtcgaaggctcgcaggtcgacatcgacaacgcgctcctcatcgaggct
cgctacttcacctcgctggtgaccggccgcgtcgcgaagaacatgattcaggcgttcttc
ttcgacctgcagtcgatcaacggcggcggttcacgtccggcaggcatcgagaagtccacc
atcaagaaggtcggcgtcctcggcgcgggcatgatgggcgcgggcatcgcgtacgtctcc
gcgaaggccggcttcgacgtcgtcctcaaggacgtcagcatcgaggctgccaacaagggc
aaggcgtacgccgaaggcattgaggccaaggcactctcgcgcggcaagaccacgcaggag
aagtccgacgcactcctcgccaagatcaccccgacggctgacccggcagatttcgccggc
gtcgacttcgtcatcgaagcggtcttcgagagtcaggaactcaagcacaaggtgttccag
gagatcgaggacatcgtcgatcccaaggcgttgctgggctcgaacacctcgacgctgccc
atcacgggtctcgccaccggcgtgaagcgtcaggaagacttcatcggcatccacttcttc
tcgcccgtcgacaagatgccgctggtggagatcatccgcggtgagaagacctccgacgag
actctggctcgcgtattcgactacgtccaggcgatccgcaagacgccgatcgtggtcaac
gactcgcgtggcttcttcacctcgcgtgtcatcggaaccttcatcaacgaggccatcggc
atgctcgccgagggcgtcgagcctgccaccatcgagcaggccggcatgcaggccggttac
ccggctgcgccgcttcagctttcggatgagctcaacctcaccctcatgcagaagatccgc
aaggaatctgccgacgccgccaaggccgagggcaaggaactgccggcagatccggccggc
gaggtcatcaacaccctcgtcgagaagttcgatcgtaagggcaagctcggtggagccggc
ttctacgattacgccgagggcaagcgcaccggcctgtggtccggactccgcgagaacttc
aactccggaacctccgatgctccgatccaggacctcatcgatcgcatgctgttcatcgag
gcgatcgagacgcagaagtgcttcgacgagaacgtcctgatcaccacggcggacgccaac
atcggctccatcatgggcatcggattcccggcctggaccggtggcgttcaccagttcatc
gtcggatacgagggcggcacggccggcttcgtcgctcgcgcaaaggaactcgctgcgcag
tacggcccgcggttcaccccgccggcttcgctaggggcatag
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