Rhodococcus erythropolis PR4: RER_04970
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Entry
RER_04970 CDS
T00881
Name
(GenBank) putative ABC transporter substrate-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer01501
beta-Lactam resistance
rer02010
ABC transporters
rer02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RER_04970
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RER_04970
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RER_04970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rer02000
]
RER_04970
Transporters [BR:
rer02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
RER_04970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
AcrIIA4
BT_2262-like_C
Motif
Other DBs
NCBI-ProteinID:
BAH31205
UniProt:
C0ZNF3
LinkDB
All DBs
Position
549644..551275
Genome browser
AA seq
543 aa
AA seq
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MEGIPLRISRIATGAVALGMTAVLITACSSGDSSGGSSSGVVNAWAGEPQNPLIPTNTSE
NMGGRVLDSLFSGLVSYTADGGTENEVAESIESTDGQNFTVKLKDGWTFTDGTPVTAKSF
VDAWNYGALSTNAQLQASFFDPIKGYDEVAAEVPTAQTMSGLKVVDDSTFTIELKQPESA
FPDRLGFTAYYPLPEVAFKDMTAFGENPIGNGPYKLDGTGAWQHNVRIDTVVNPDYNGNR
KPKNAGVDFIMYNSLDTAYTDLLANNVDVLDQVPPSAVTTFESDLPGRTVNQPSATIETF
TIPGRLPHFSGEEGMLRRQAISMAINRDQITQQIFNKTRTPALDFTSPAIKGWNDSLTGN
SNVKFDPEAAKAAWAKADAIAPWSGSFEIAYNSDGGHQEWVDATANSIRNTLGIDAKGKQ
YATFAQIRTEATDRTIQSSFRSGWQGDYPQQYGFLAQNYQTGGSSNDGDYSNPEFDRLLR
ESAGQTDQAKAQELLDQAQEVLLKDLPAVPTWYRNAASGWSENVSNVTISWNGVPVYEDI
EKN
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
gtggaaggaattcctttgcgtatctcacgcatagcgaccggcgcggtcgcgctcggaatg
acggcagtgctgatcacggcatgttcgtccggcgattcgtcgggcggatcgtccagtggc
gtcgtcaacgcctgggcgggcgagcctcagaacccgttgatccccacgaacacgagtgag
aacatgggcggccgcgtcctcgactcactgttctccggtctcgtttcgtacaccgcagac
ggcggtacggagaacgaggttgccgagtccatcgagagcaccgacggtcagaacttcacc
gtcaagctcaaggacggctggaccttcacggacggcacccccgtcaccgcgaagtcgttc
gtcgacgcgtggaactacggagccctctccaccaacgctcagcttcaggcatcgttcttc
gatccgatcaagggctacgacgaagttgccgccgaggttccgacggcacagaccatgtcg
ggtctgaaggttgtggacgactccaccttcaccatcgaactcaagcagcccgagtcggcg
ttccccgatcgcctcggcttcacggcgtactacccgctgcccgaggtcgcgttcaaggac
atgaccgccttcggtgagaacccgatcggcaacggcccctacaagctcgacggaaccggc
gcgtggcagcacaacgtccgcatcgacaccgtcgtgaacccggactacaacggcaaccgt
aagccgaagaacgccggcgtcgacttcatcatgtacaacagcctcgacacggcgtacacc
gatctcctggccaacaacgtcgacgttctcgaccaggttccgccgagcgccgtcacgacc
ttcgagtcggacctgcccggacgcaccgtcaaccagccgtcggcaaccatcgagacgttc
acgatcccgggtcgcctgccgcacttcagcggcgaagagggcatgctccgccgtcaggcg
atctcgatggcgatcaaccgcgatcagatcacccagcagatcttcaacaagaccaggacg
cctgcactcgacttcaccagccccgcaatcaagggctggaacgactcgctgaccggtaac
agcaacgtgaagttcgatcccgaggcggccaaggctgcttgggccaaggccgacgccatc
gcaccgtggtccggcagcttcgagatcgcctacaactccgacggcggacaccaggaatgg
gtcgatgccacggcgaacagcatccgcaacaccctcggtatcgacgcgaagggcaagcag
tacgccaccttcgctcagatccgcaccgaagccaccgaccgcaccatccagagctctttc
cgctccggttggcagggcgactacccgcagcaatacggcttcctggcgcagaactaccag
accggcggcagctccaacgacggtgactactccaaccccgagttcgaccgcctcctgcgc
gaatcggccggccagaccgatcaggcgaaggctcaggaactgctcgatcaggcccaggaa
gtcctgctcaaggacctgcccgcagttccgacgtggtaccgcaacgctgccagtggatgg
tcggagaacgtttccaacgtgaccatcagctggaacggtgttccggtctacgaagacatc
gaaaagaactga
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