Rhodococcus erythropolis PR4: RER_05830
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Entry
RER_05830 CDS
T00881
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer00250
Alanine, aspartate and glutamate metabolism
rer00310
Lysine degradation
rer00350
Tyrosine metabolism
rer00650
Butanoate metabolism
rer00760
Nicotinate and nicotinamide metabolism
rer01100
Metabolic pathways
rer01120
Microbial metabolism in diverse environments
Module
rer_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RER_05830 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RER_05830 (gabD)
00310 Lysine degradation
RER_05830 (gabD)
00350 Tyrosine metabolism
RER_05830 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
RER_05830 (gabD)
Enzymes [BR:
rer01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
RER_05830 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
RER_05830 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
RER_05830 (gabD)
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Motif
Pfam:
Aldedh
DUF3102
Motif
Other DBs
NCBI-ProteinID:
BAH31291
UniProt:
C0ZNN9
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All DBs
Position
658908..660353
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AA seq
481 aa
AA seq
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MSNVSDLLDSVPKGLWLGGKLVPAEKTFAVYNPATGEELAQVADATAADGIRALDLAAAA
QEDWAATPARVRGEILRTAFELLHARAEDFALMMTLEMGKSLAESRGEVNYGGEFLRWFS
EEAVRIGGRFTQAPAGNGRILVTKEAVGPVLAITPWNFPLAMGTRKIGPALAAGCTIIVK
PAEDTPLTMQLLGQVFADAGLPDGVLSILPTSDAASISGPLMEDARLRKVTFTGSTGVGK
LLVRGAADKLLRTSMELGGNAPFIVFDDADIDAAVDGAMLAKMRNGGEACTAANRIYVAN
SVREEFTDKFTAKVAALKVGAGDAEGTNIGPLINTKQLATVTGLVDDAVSKGARVRTGGS
APEGAGFFFTPTVLDQVPADARLLKEEIFGPVAAVVGFDTEDEAIAAANNTEYGLVAYFY
TRDIDRAMRVSAKLDTGMVGVNRGAISDAAAPFGGVKESGFGREGGTEGIDEYLDTKYVA
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgtctcggatcttctcgactcggtacccaagggtctctggctcggcggcaag
ctcgtcccggccgagaagacctttgcggtctacaacccggcaacgggtgaggaactcgcc
caggtagccgacgccaccgctgccgacggtatccgtgcgctcgacctcgccgctgcggcg
caggaagactgggcggccacgccggcacgtgtacgcggcgagatcctgcgcaccgccttc
gaattgctgcacgcccgcgccgaggacttcgcgctgatgatgaccctggaaatgggtaag
tcgttggcagagagccgcggtgaggtcaactacggcggcgaattcctgcgctggttcagc
gaggaagcagtacgcatcggcggacgtttcacgcaggctccggccggcaacggtcgcatc
ctggtcaccaaggaagccgtcggaccggtccttgcgatcaccccgtggaacttcccgctc
gccatgggcacacgcaagatcggaccggcgctggctgccggttgcaccatcatcgtcaag
cccgccgaggacacgccgctgaccatgcagctcctcggtcaggtgttcgccgatgccggt
ctgcccgacggtgtgctctcgatcctcccgacgtccgacgcggcctccatcagtggaccg
ctgatggaagatgcgcgtctgcgcaaggtcaccttcaccggctccacgggcgtcggaaag
ctgttggtgcggggtgccgctgacaagctgctccgcacgtcgatggaactcggtggcaat
gcgccgttcatcgtcttcgacgacgccgacatcgacgcagctgtcgacggcgcaatgctc
gcgaagatgcgtaacggcggcgaggcctgcaccgcggccaaccgcatctacgtcgccaac
tcggtgcgcgaggagttcaccgacaagttcaccgccaaggttgcggccttgaaggtgggc
gccggtgacgccgagggcaccaacatcggcccgctgatcaacaccaagcagctcgcaacc
gtcaccggactcgtcgacgacgccgtgtccaagggcgctcgcgttcgcaccggtggatcg
gcgcccgaaggagccggcttcttcttcaccccgaccgttctggatcaggtgcccgccgat
gcgcgcctgctgaaggaagagatcttcggacccgttgcggcagtggtcggtttcgacacc
gaagacgaagcgatcgcggctgcgaacaacaccgagtacggcctcgtggcgtacttctac
acccgcgacatcgaccgggcgatgcgcgtctcggccaagctggacaccggcatggtcggc
gtcaatcgcggcgcgatctccgatgctgcggcgccgttcggtggcgtgaaggaatcgggc
ttcggccgtgaaggcggtaccgagggtatcgacgagtatctcgataccaagtacgtagcg
ctctaa
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