Rhodococcus erythropolis PR4: RER_15260
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Entry
RER_15260 CDS
T00881
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RER_15260 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rer03019
]
RER_15260 (groEL)
03110 Chaperones and folding catalysts [BR:
rer03110
]
RER_15260 (groEL)
03029 Mitochondrial biogenesis [BR:
rer03029
]
RER_15260 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rer04147
]
RER_15260 (groEL)
Enzymes [BR:
rer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RER_15260 (groEL)
Messenger RNA biogenesis [BR:
rer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RER_15260 (groEL)
Chaperones and folding catalysts [BR:
rer03110
]
Heat shock proteins
HSP60 / Chaperonin
RER_15260 (groEL)
Mitochondrial biogenesis [BR:
rer03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RER_15260 (groEL)
Exosome [BR:
rer04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RER_15260 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
RER_15260 (groEL)
Exosomal proteins of breast cancer cells
RER_15260 (groEL)
Exosomal proteins of colorectal cancer cells
RER_15260 (groEL)
Exosomal proteins of bladder cancer cells
RER_15260 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAH32234
UniProt:
C0ZUI9
LinkDB
All DBs
Position
1663569..1665194
Genome browser
AA seq
541 aa
AA seq
DB search
MAKIIAFDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LDDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIE
KAVEAVTARLLETAKEIDTKEQIAATAGISAGDPSIGELIAEAMDKVGKEGVITVEESNT
FGLQLELTEGMRFDKGYISAYFATDAERQEAVLEDAYILLVSSKISTVKDLLPLLEKVIQ
SGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAQLADIAILTGGEVIS
EEVGLSLETAGLELLGQARKVVITKDETTIVEGAGDADAIAGRVSQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
APALDDLKLEGDEATGANIVRVALSAPLKQIAFNAGLEPGVVADKVSNLPAGHGLNAATN
EYGDLLAAGINDPVKVTRSALQNAASIAALFLTTEAVVADKPEKAGAPAGDPTGGMGGMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatcatcgcgttcgacgaagaggcacgtcgtggcctcgagcgaggcctcaac
gccctcgccgacgctgtcaaggtgacgttgggccccaagggtcgcaacgtcgttctcgaa
aagaagtggggcgcccccacgatcaccaacgatggtgtttccatcgccaaggagatcgaa
ctcgacgacccgtacgagaagatcggcgccgagctcgtcaaggaggtcgccaagaagact
gacgacgtcgctggcgacggcaccaccaccgctaccgttctcgcacaggctctggtccgt
gaaggcctgcgcaacgtcgcagccggcgcgaacccgctcggcctcaagcgcggcatcgag
aaggctgtcgaggctgtcacagctcgcctgctcgagaccgccaaggagatcgacaccaag
gagcagatcgctgctaccgccggtatttccgccggcgacccgtccatcggtgagctcatc
gccgaggctatggacaaggtcggcaaggaaggcgtcatcacggtcgaggagtccaacacc
ttcggcctgcagctcgagctcaccgagggcatgcgcttcgacaagggctacatctcggcg
tacttcgccaccgatgcagagcgtcaggaagccgtcctcgaagacgcgtacatcctgctc
gtcagctccaagatctccacggtcaaggacctgctgcccctgctggagaaggtcatccag
tccggcaagccgctcctgatcatcgccgaggacgtcgagggcgaagctctctccaccctc
gtggtcaacaagatccgtggcaccttcaagtctgttgccgtcaaggctcccggcttcggt
gaccgtcgtaaggctcagctcgccgacatcgccatcctcaccggtggcgaggtcatcagc
gaagaggtcggactctccttggagaccgcaggcctcgagctcctcggccaggcacgcaag
gtcgtcatcaccaaggacgagaccaccatcgtcgagggtgccggcgacgccgacgcaatc
gccggtcgtgtcagccagatccgcgccgagatcgagaacagcgactcggattacgaccgt
gagaagctgcaggaacgtctggccaagctggccggcggcgttgcagtcatcaaggccggc
gctgctaccgaggtcgagctcaaggagcgcaagcaccgcatcgaagatgcagtgcgtaac
gcaaaggcagccgtcgaagagggcatcgtcgccggtggtggcgttgcacttctccaggca
gctcccgcgctggacgacctcaagctcgaaggtgacgaggcaaccggcgcgaacatcgtt
cgcgttgcactgtccgctccgctcaagcagatcgcattcaacgcaggcctcgagcccggc
gttgttgcggacaaggtctccaatctgcccgcaggtcacggcctcaacgctgcgaccaac
gagtacggcgacctgctcgctgcaggcatcaacgacccggtcaaggtcacccgctcggca
ctgcagaacgcagcgtccatcgcggctctgttcctgacgaccgaagccgttgtcgctgac
aagcccgagaaggccggagcgcctgcaggcgatccgaccggcggcatgggcggcatggac
ttctga
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