Rhodococcus erythropolis PR4: RER_19240
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Entry
RER_19240 CDS
T00881
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RER_19240 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rer03019
]
RER_19240 (groEL)
03110 Chaperones and folding catalysts [BR:
rer03110
]
RER_19240 (groEL)
03029 Mitochondrial biogenesis [BR:
rer03029
]
RER_19240 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rer04147
]
RER_19240 (groEL)
Enzymes [BR:
rer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RER_19240 (groEL)
Messenger RNA biogenesis [BR:
rer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RER_19240 (groEL)
Chaperones and folding catalysts [BR:
rer03110
]
Heat shock proteins
HSP60 / Chaperonin
RER_19240 (groEL)
Mitochondrial biogenesis [BR:
rer03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RER_19240 (groEL)
Exosome [BR:
rer04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RER_19240 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
RER_19240 (groEL)
Exosomal proteins of breast cancer cells
RER_19240 (groEL)
Exosomal proteins of colorectal cancer cells
RER_19240 (groEL)
Exosomal proteins of bladder cancer cells
RER_19240 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAH32632
UniProt:
C0ZW97
LinkDB
All DBs
Position
2105858..2107468
Genome browser
AA seq
536 aa
AA seq
DB search
MSKQIAFNETARRALEAGVDKLADAVKVTLGPRGRHVVLAKAFGGPTVTNDGVSIAREIE
LEDPFENLGAQLVKSVATKTNDVAGDGTTTATVLAQAIVRGGLKNIAAGANPMALGVGIN
AAADKVVEELLAAATPVEGEKSIAQVATVSSRDEEIGKLVGEALTRVGTDGVVTVEESST
VATELVVTEGVQFDKGYLSPYFVTDIDAQKAVYEDALILLFREKISSLPDFLPLLEKVAE
SGKPLLIIAEDVEGEVLSTLVVNSIRKTIKAVAVKAPFFGDRRKAFLDDLAVVTAGTVIN
TDVGLSLKEAGLDLLGSARRVVVTKDETVIVDGAGTADDIATRVAQLRREIENTDSDWDR
EKLEERLAKLSGGVAVIKVGAATETDLKERKFRVEDAVNAAKAAVAEGIVPGGGSALVQA
GTALIGNLGLSGDEATGVAVVREALNAPLFWISSNAGIDGSVVVSKVAEMTKGEGFNAAT
LTYGNLLADGVVDPVKVTRSAVVNAASVARMILTTESAVVEKPTEAVADTGHGHSH
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcaaattgcgttcaacgagaccgcacgccgcgctctcgaagccggagtcgac
aagcttgccgacgccgtcaaggtgaccttgggcccgcgtggacgccacgtcgtgctcgcc
aaggcattcggcggccccaccgtcaccaacgacggtgtgagcatcgcccgtgagatcgag
ctcgaagatcccttcgagaacctcggcgcacagctcgtcaagagcgtcgccaccaagacc
aacgatgttgccggcgacggcaccaccaccgcgaccgttctggcccaggccatcgtccgc
ggcggactcaagaacatcgcagcgggcgcgaacccgatggcgctcggcgtcggcatcaac
gccgcagccgacaaggtcgtcgaggaactgctcgccgcggccaccccggtcgagggcgag
aagtcgatcgcccaggtcgccaccgtctcctcgcgtgacgaagagatcggcaagctcgtc
ggcgaggcactcacccgtgtcggaaccgacggcgtcgtgacggtcgaggaatcctccacc
gttgcaaccgaactcgttgtcaccgaaggcgttcagttcgacaagggctacctctcgccc
tacttcgtcaccgacatcgatgcgcagaaggccgtctacgaagatgcgttgatcctgctc
ttccgcgagaagatcagctcacttcccgacttcctgccgctgctcgagaaggttgccgaa
tccggcaagccgctcttgatcatcgccgaggacgtcgagggtgaagttctctccaccctg
gtggtcaactccatccgcaagaccatcaaggccgtcgccgtcaaggcgccgttcttcggt
gatcgtcgcaaggcattcctcgacgacctcgcagtcgtcacggcaggcaccgtcatcaac
accgacgtcggcctctccctgaaggaagccggcctcgacctgctcggcagcgctcgccgc
gttgtcgtcaccaaggacgagacggtcatcgtcgacggtgccggcaccgctgacgacatc
gcgacccgcgtcgcgcagttgcgtcgcgagatcgagaacaccgattcggattgggaccgc
gagaagctcgaagagcgtctggcgaagctgtccggcggcgtggccgtcatcaaggtcggc
gcagccaccgaaaccgatctcaaggaacgcaagttccgcgtcgaggatgcggtcaacgca
gccaaggcagcagttgccgagggcatcgtccccggtggcggatcggctctcgttcaggcc
ggtacggctctgatcgggaacctcggcctgtcgggtgacgaggccaccggcgttgccgtg
gtccgtgaagccctcaacgctccgttgttctggatctccagcaacgcaggcatcgacgga
tccgtcgttgtcagcaaggtcgccgagatgaccaagggcgaaggcttcaacgctgccacc
ctcacctacggcaacctgcttgccgacggcgtcgtcgacccggtcaaggtcactcgctcg
gcagtggtcaacgccgcttccgtcgcgcgcatgatcctcacgaccgagagcgctgtcgtc
gagaagccgaccgaggcagttgccgacaccggacacggtcacagccactag
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