Rhodococcus erythropolis PR4: RER_20430
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Entry
RER_20430 CDS
T00881
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer00020
Citrate cycle (TCA cycle)
rer00190
Oxidative phosphorylation
rer00650
Butanoate metabolism
rer00720
Other carbon fixation pathways
rer01100
Metabolic pathways
rer01110
Biosynthesis of secondary metabolites
rer01120
Microbial metabolism in diverse environments
rer01200
Carbon metabolism
Module
rer_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rer_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rer_M00149
Succinate dehydrogenase, prokaryotes
rer_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RER_20430 (sdhA)
00650 Butanoate metabolism
RER_20430 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RER_20430 (sdhA)
00720 Other carbon fixation pathways
RER_20430 (sdhA)
Enzymes [BR:
rer01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RER_20430 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
DAO
Pyr_redox_2
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
BAH32751
UniProt:
C0ZWL6
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All DBs
Position
complement(2232975..2234726)
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AA seq
583 aa
AA seq
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MQEHRYDVVIVGAGGAGMRAAIEAGPRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYLADQDAVEIMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
RDHGKAPVRRACYAADRTGHMILQTLYQNCVKHDVEFFNEFYALDIAITETEDGPVATGV
ICYELSTGELHIFHAKSIIFATGGSGRMYKTTSNAHTLTGDGMGIIFRKGLPLEDMEFHQ
FHPTGLAGLGILISEAVRGEGGILRNADGERFMERYAPTIKDLAPRDIVARSMVLEVLEG
RGAGPNKDYVYIDVTHIPEEVLDEKLPDIMEFSRTYLGVDPVKEPVPVYPTCHYVMGGIP
TKINGEVLRNNDEVVKGLYAAGECACVSVHGANRLGTNSLLDINVFGRRAGIAAAEYANS
TEFVDLPETPAAMVEDWVGVILSDHGHERVADIRTELQQSMDNNASVFRTEERLTQALKD
VRALKERYNHITVQDKGKRYNSDLLEAIELGFLLEMAEVTVVGALNRKESRGGHAREDFP
DRNDAEYMKHTMAYKEGDGLLSDIRLDYKPVIQTRYEPMERKY
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacatcgttatgacgtggtcatcgtcggcgccggcggcgcaggcatgcgtgcg
gcaatcgaagctggcccccgtgcccgcacggccgtactgaccaagctctaccccacccgc
agccacaccggcgcggcccagggcggcatgtgtgccgcactggcgaacgtggaggaagac
aactgggagtggcacaccttcgacaccgtcaagggcggcgactacctcgccgaccaggac
gccgtcgagatcatggccaaagaggccatcgacgcggtgctcgacctcgagaagatgggt
ctgccgttcaaccgcacgcccgaaggcaagatcgaccagcgtcgattcggtggccacaca
cgtgaccacggcaaggcacccgtccgccgtgcgtgttacgcagccgaccgcaccggtcac
atgatcctgcagacgctgtaccagaactgcgtcaagcacgacgtcgagttcttcaacgag
ttctatgcgctcgacatcgccatcaccgagaccgaggacggcccggttgccaccggtgtc
atctgctacgagctctcgaccggcgagctgcacatcttccacgccaagtcgatcatcttc
gcgaccggcggctcgggacgtatgtacaagacgacgtccaacgcgcacaccctcaccggt
gacggcatgggcatcatcttccgcaagggcctgcccctcgaggacatggagttccaccag
ttccacccgacaggactcgccggtctcggcatcctgatctcggaagccgtccgtggtgaa
ggtggcattctccgtaatgccgacggcgagcgcttcatggagcgatacgcccccaccatc
aaggacctcgctccgcgtgacatcgtggcccgttcgatggtcctcgaggttctggagggc
cgcggcgccggcccgaacaaggactacgtctacatcgacgtgacgcacatccccgaggaa
gttctcgacgagaagctccccgacatcatggagttctcgcgcacctatctcggcgtggac
cccgtcaaggagcccgtgcccgtctacccgacgtgccactacgtcatgggcggtatcccc
accaagatcaacggtgaggttctgcgcaacaacgacgaggtcgtcaagggcctgtacgcc
gccggcgaatgtgcctgcgtttccgtgcacggtgcaaaccgcctcggcaccaactcgctc
ctcgacatcaacgtgttcggccgccgcgccggcatcgctgccgccgagtacgcgaattcc
accgagttcgtcgacctgccggaaaccccggctgcgatggtcgaagactgggtcggcgtc
atcctttccgatcacggccacgagcgcgttgcggacatccgcaccgagctgcagcagtcg
atggacaacaacgcctccgtcttccgcaccgaagagcgcctcacccaggcactcaaggat
gtgcgtgctctcaaggagcgctacaaccacatcacggtccaggacaagggcaagcgctac
aacagcgacctgctcgaggccatcgagctgggcttcctcctcgaaatggcagaggtcacc
gtcgtcggcgccctcaaccgcaaggaatcgcgcggcggccacgctcgtgaggacttcccg
gatcgcaacgacgccgagtacatgaagcacacgatggcgtacaaggagggtgacggtctg
ctctccgacatccgtctggactacaagccggtgatccagacccgctacgagccgatggag
cgtaagtactga
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