Rhodococcus erythropolis PR4: RER_22180
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Entry
RER_22180 CDS
T00881
Name
(GenBank) putative ATP-dependent DNA helicase
Organism
rer
Rhodococcus erythropolis PR4
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD-helicase
UvrD_C
AAA_19
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAH32926
NITE:
RER_22180
UniProt:
C0ZX41
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All DBs
Position
2411684..2414995
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AA seq
1103 aa
AA seq
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MHRTAPSPIPRTWDEGTTRLFAPPSEDPFQLAFGPVSFGSAAAWNPWQVLGSPGTGKTSL
LVDLAVQKISGGEDPESVLVLTQSRRAATQVREQITAGLLGYEQERGPQATREPLVRTVH
SYAFAVLRLQAAAHGNAPPRLITGAEQDSVLREMLRGDIEDGALRWPERLRPALGLNGFA
VELRDLMLRANERGLGPEDLVKLGKKRGRPEWVAAGRFAEAYEQGVLLRGSVGVEAPEAT
APALDAAELIGAALTAFATDPELLRSERARIRHLLVDDAQHLDPQAAQLVRLIGTGTAGT
VIAGDPDQSVFGFRGADSAFLLGLAERGDERQIVLPVTYRNNADVASIAAKIAARLPGNL
AHRIAVPSDLTDENPGRASVRVLGTTAKEAAVVADTLRRAHLLDGIAWSDMAVIVRSVPR
TLAPLRRALLAAGVPVTTAATELPLARQHGVSGLLLVLRALGGDQFTGDDALALMAGPIG
GAEPVTLRRLRRGLRRVELASGSDRDSSELLRLILIDEDRAQSKRLMGKLTDVEAAALNR
VLSVLRKARVPLERGLGVEEVLWAAWQATGLERRWAAASARGGPIGSQADRDLDAVVALF
DAAANYVDRLPRSQLSGFVDYLTSQEIPTDSRSRSVIAPDAVTVVSAHAAAGREWAVVAV
AGVQEGLWPSLRARGSLLRTEALIDLVNGVSDGSDSAAERLSRTAPLLAEERRLFLVACS
RARRRLLITAVESASGDTDLVPSRFVDELIRGDAYSDDPSSDLDVVAPETGDTRVLSLPA
LVAQLRSVVCDPDIAHFDPEKHSRAARQLARLAAAGVRGAHPDQWYGTAEPSTAAPMWQP
EDGPVSLSPSTIELLETCPLRWVFERHGGSDGDNTHAIAGTLVHTLVQALAGRIPPDQVE
KALENAWESIDLGSQWYSRRELNRTREMLATFTAWMNATRGELTEVGVEVAVEGVLEPRE
EGAPAVKLRGRIDRLERDTQGRPVVVDVKTARNPVSNEAAQSHAQLAAYQVAAAEGAIAG
EPATQPGGARLVFVAKSNKKDGAAQRVQPPLTAEAVEMWRDVIHNAAAATQGPQYLARVN
DGCRHCPVRSSCPAHDEGRQVSN
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
gtgcaccgaactgcgccgtctccgataccccgaacgtgggatgaagggacgacgcggctc
ttcgcgccgccgtccgaggatccgttccagctcgcgttcggccctgtttctttcggttcg
gcagcggcttggaatccctggcaggtactcggcagtcccggaaccggcaagacgtccctt
ctcgtggatctggcagtgcagaagatctcgggtggcgaagatcctgaatcggtcctggtg
ctcacccagtcacgccgagccgcgacgcaggtccgcgagcagatcaccgctgggttgctc
gggtacgaacaggaacgcggaccgcaggcaacccgtgagccgctggtacgcaccgttcac
tcttacgcctttgccgttctccggcttcaagccgcagcacacggcaacgcgccgccacgc
ctgatcaccggcgccgagcaggactcggtgctccgcgagatgttgcgcggcgacatcgaa
gacggtgcgctccggtggccggagcgcctgcgacccgcgttgggtttgaacggctttgcc
gtcgaacttcgagatctgatgctgcgagccaacgagcgcgggctcggccccgaagatctg
gtcaagctcggcaagaagcgtggccgtccggagtgggtggcggccgggcggttcgccgag
gcctacgagcaaggcgtgctgctgcgcggcagtgtcggtgtcgaggctccggaggcgacg
gcgccggcactcgacgcggccgagttgatcggtgcggccttgaccgcgttcgccaccgat
cccgaattgcttcgctccgagcgcgctcggatccggcacctccttgtcgacgacgcacaa
catctggatccgcaggcggcgcaactggttcggttgatcggaaccggaactgcgggcacg
gtcatcgccggtgatcccgatcagtccgtcttcggattccgcggtgcggattcggcgttc
ctgctcggactggccgagcgcggagacgagcgccagatcgttctgcccgtcacgtatcgc
aacaacgccgacgtcgcgtcgatcgcggccaagatcgctgcgcggcttcccggcaacttg
gctcatcgcatcgcggttccatccgatctcaccgatgagaatccgggacgggcgtcggtg
cgggttctcggtacgacggccaaagaggcggcagtcgtcgcagataccttgcgccgggcg
catctgctggacgggattgcgtggtccgacatggccgtcatcgtgcggtcggtcccgcgc
actctcgcccctctccggcgagccctgctcgcggcgggggtgcccgtcacgaccgctgcc
accgaattgccgctcgcgcggcaacacggagtgtccggcctgctgctggtccttcgggcg
ctcggcggcgatcagttcaccggcgacgacgcgcttgccctgatggccggtcccatcggc
ggcgccgaaccggtcaccctgcgccggttgcgtcgtggcctgcgccgagtcgagttggca
tcgggaagtgatcgggactcttcggagttgttgcggctcattctgatcgacgaggatcgt
gcgcagtccaagcgcctgatgggcaagctgacagacgtcgaagctgcggccctcaatcgc
gtgctgtcggtccttcgcaaggcccgagtgcctctcgagcgtggtctcggggtcgaagaa
gttctgtgggcggcctggcaggcgacggggctggaacggcgctgggcggccgcgtcggcg
cgcggcggaccgatcggctcacaagccgatcgagacctcgacgccgtagtcgcactcttc
gacgcggctgccaactacgtcgaccggctgccgcgttcgcaactctccggttttgtcgac
tacttgaccagccaggagataccgaccgactcgcggagccgatcggtcatcgctcccgac
gccgtcaccgtggtcagcgctcacgccgcggcggggcgcgaatgggcggttgtggcggtg
gcgggtgtgcaggaggggctctggccgagtttgcgggcacgcggctcgctactgcgtacc
gaagctcttatcgacctggtcaacggagtctccgacggcagtgactcggctgccgaacga
ctctcgcgaaccgcgccgcttctggccgaagaacgcaggttgttcctggtcgcctgtagc
cgtgctcgtcgccgtctgctgatcaccgcagtcgaatcggcttcgggggacaccgacttg
gtgccttcgcggttcgtggacgaattgatccgtggtgacgcgtactcggacgacccgtcc
tccgatctcgacgtcgttgcacccgagaccggggatacccgggttctgtcgctgcctgca
ctggtcgcacagcttcgcagcgtggtgtgtgatcccgacatcgcgcatttcgaccccgag
aagcattctcgggctgctcgccagttggcccgtctggctgcggccggagtacgaggcgcg
catccggatcagtggtacggcacagccgagccgagtaccgctgctcccatgtggcaaccc
gaggacggaccggtttcactgtccccgtccaccatcgagcttctcgaaacatgtcctctc
cgatgggtgttcgagcgtcacggtggcagcgacggagacaacactcatgcgatcgccggt
acgctggtccacaccttggtgcaggcactggccggccggattccaccggatcaggtcgag
aaggcactcgaaaatgcctgggaatccatcgatctgggatcgcagtggtactcgcgccgt
gaactcaatcgaacgcgggagatgctggcgacgttcaccgcctggatgaacgcaactcgc
ggtgagctgaccgaagtcggcgtcgaggtcgcggtcgagggggtcctcgaaccgcgcgaa
gaaggagcgcctgcggtcaagctacgtggccggatcgaccggctcgagcgcgacacccaa
ggtcgtccagtggttgtcgacgtcaagactgcgcgaaaccccgtcagcaacgaggccgcg
caatctcatgcgcagttggcggcgtaccaggtcgcagcggccgaaggtgcgattgccggc
gaaccggccacacaacccggcggtgcacgcctggtattcgtggccaagtccaacaagaag
gacggtgcggcgcagcgagttcagccgccgctgacggccgaagccgtcgagatgtggcga
gacgtcattcacaacgctgccgcagcgacccaaggaccgcagtacctggccagggtcaac
gacggatgtagacattgcccggtgcgttcgagttgcccggcacacgacgagggacgacag
gtgagtaactaa
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