Rhodococcus erythropolis PR4: RER_22240
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Entry
RER_22240 CDS
T00881
Symbol
uvrD2
Name
(GenBank) probable ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer03420
Nucleotide excision repair
rer03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RER_22240 (uvrD2)
03430 Mismatch repair
RER_22240 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rer03400
]
RER_22240 (uvrD2)
Enzymes [BR:
rer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RER_22240 (uvrD2)
DNA repair and recombination proteins [BR:
rer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RER_22240 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
RER_22240 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
C1_1
Motif
Other DBs
NCBI-ProteinID:
BAH32932
UniProt:
C0ZX47
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All DBs
Position
2421322..2423478
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AA seq
718 aa
AA seq
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MSERPAMMVPMPADTGLDPEQSAAVLAPRGPVCVLAGAGTGKTRTITRRIAHLVADGHVS
AGQVLAVTFTARAAGEMRGRLRELGVGGSGPQVQARTFHAAALRQLKYFWPQVIGDTPWR
LLDRKFAVVSSAAARVGLSTSTESVRDLASEIEWSKASLIAPEDYPRAIAKIRREAPVDA
TKVAQVYAAYEELKARGQDGMLLDFDDLLLHTAAALEEHSTVADEFRERYRCFVVDEYQD
VTPLQQRVLDAWLGDRDDLTVVGDANQTIYSFTGATPNYLLDFSRKFPEATVVRLERDYR
STPEVVSLANRVIGAARGRIAGTRLQLIGQRAPGPEPEFMEFDDEPAEALGVARAIKRLI
AAGTPAAEIAVLYRINAQSEAHEQALTKLGIPFQVRGGEGFFTRTEVRQAVAALRQAAGR
DDLPEGADNGEALVSLVRAVLAPLGLTNEEPSGTQARERWASLSALVALTEEQLVHEPEL
SLTGLLQELTARAEARHPPTVQGVTLASLHAAKGLEWDAVFLVGLNDGTLPIQHVLGDAN
SGADDVAVEEERRLLYVGVTRAREHLQLSWALARNEGGRKSRRRSRFLNGLIPEDSPASR
VAAPSSGNKKRPRCRVCGKPLIGTSATMLGRCEKCPSNVDLELLEHLKAWRLDKSRELKV
PAYVVFSDNTLMAIAEQRPQDNRGLVSIPGIGPKKLDNFGEDVLAVIRGELRAATLDI
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggaacgtcctgccatgatggtccccatgcctgcggacaccggactggatccagaa
caatcggccgccgtgctcgcgccacgcggcccggtatgtgtcctcgcgggcgctggaaca
ggcaaaacccgcaccattacccgccggatcgcgcatctggttgccgacggtcatgtctcc
gccggccaggtgcttgccgtgacattcacagcgcgagcggccggcgaaatgcgtggacgg
cttcgtgagctgggggttggtggaagtgggccgcaggtacaggctcgcaccttccacgcc
gccgctcttcgtcaactcaagtacttctggccgcaggtgatcggtgacacgccgtggcgt
ctgctcgatcggaagttcgcggttgtcagcagtgccgccgctcgtgtcgggttgtccacc
agcacggaaagcgtgcgcgacctcgccagcgaaatcgagtggtccaaggcctcactgatc
gcgcccgaggactacccacgcgcgatagccaagattcgtcgcgaggcgccggtcgatgcc
accaaggttgcgcaggtctacgcggcatacgaagagctgaaggcacgtggccaggacggc
atgctcctcgatttcgacgatctcctacttcacaccgcggctgcgctcgaagagcattcg
acggttgccgacgagttccgcgagcggtaccgctgcttcgtggtcgacgagtatcaggac
gtcaccccgctgcaacagcgtgtgctcgacgcctggctcggcgaccgcgacgacctgacc
gtggtgggcgatgcgaatcagaccatctattccttcaccggcgccaccccgaactatctg
ttggacttctcgcggaaattccccgaagcgaccgtcgtccggctcgaacgggactaccgc
tccacccctgaggtcgtgtcgttggcgaaccgcgtgatcggtgcagcgcgcggacggatc
gccgggacgcgacttcagttgatcgggcaacgcgctccggggcctgagccggagttcatg
gagttcgacgacgagcctgccgaagcgctcggcgttgcgcgggcgatcaaacggctgatc
gcggcaggcactccagcggccgagatcgctgttctgtatcggatcaatgctcagtcggag
gcgcacgagcaggcactcaccaagctcggcattccgttccaggtgcgtggtggagagggc
ttcttcacccgcaccgaggtccgtcaggcagtggcggcactgcgtcaggccgccggacgg
gacgacctccccgaaggcgcagacaacggcgaagcgctggtttcactggttcgcgctgta
ctcgcgccactcggtctgaccaatgaagaaccttcgggcacgcaagcccgcgagcgctgg
gcgtcgctctcggctctcgtggcgctgaccgaagaacagctcgtccacgaacccgaactg
tcgctcaccgggctgctacaggagctcacagcccgagccgaggcgcggcacccaccgacc
gtgcagggcgtgacgttggcttcgcttcacgcggccaaggggctcgaatgggatgcggtg
ttcctggtcggcctcaacgacggcaccctgccgatccaacacgttctcggcgacgccaat
tcgggcgccgacgacgtcgcggtggaggaggagcgtcggcttctgtacgtgggtgttacc
cgcgcccgcgagcatctgcagctgtcttgggcattggctcgcaatgaggggggacgcaag
tcccgtcgccggtcgaggttcctcaacgggctcatccccgaggactcaccggcttcgcgc
gttgccgcgccgtcgtcggggaacaagaagcgtccgcgctgccgcgtctgcggcaaaccg
ttgatcgggacgtcggcgacaatgctcgggcgctgcgaaaaatgcccgtccaatgtcgac
ctggaattgctcgagcacctcaaggcctggcggctggacaagtcccgagaactcaaagtt
ccggcctatgtcgtcttcagcgacaacacactgatggctattgccgaacaacgaccacag
gacaatcgtggactggtttcgatccctggaatcgggccgaagaaactcgacaacttcggg
gaagacgtactagctgtcattcgcggcgaactgcgtgcggcaacactcgatatctga
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