Rhodococcus erythropolis PR4: RER_26440
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Entry
RER_26440 CDS
T00881
Symbol
gpsI
Name
(GenBank) guanosine pentaphosphate synthetase/polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RER_26440 (gpsI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rer03019
]
RER_26440 (gpsI)
03016 Transfer RNA biogenesis [BR:
rer03016
]
RER_26440 (gpsI)
Enzymes [BR:
rer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RER_26440 (gpsI)
Messenger RNA biogenesis [BR:
rer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RER_26440 (gpsI)
Transfer RNA biogenesis [BR:
rer03016
]
Prokaryotic type
tRNA degradation factors
RER_26440 (gpsI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
BAH33352
UniProt:
C0ZYB7
LinkDB
All DBs
Position
2837891..2840161
Genome browser
AA seq
756 aa
AA seq
DB search
MTENSVVEVDEGVFESTAVIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDETMLLSATS
ASKHPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVD
GLRNEIQVVVTVMSLNPQDLYDVVAINAASASTQIAGLPFSGPVGGVRVALIVSEDNKAG
QWVAFPTVDQLENAVFDMVVAGRVVSGSGDNADVAIMMVEAEATDNVIAKIADGAQAPTE
AIVAEGLEAAKPFIARLCAAQAALASKAAKPTGDYPVFPAYQDDVFAAVEAAASEKLNAA
LTIAGKQERDDKTDEVKVEVLEQVAPNFEGREKELGAAFRSLTKKLVRQRILRDQFRIDG
RGVTDIRSLSAEVAIIPRAHGSALFERGETQILGVTTLDMVKMAQQVDSLGPETTKRYMH
HYNFPPYSTGETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALSSNGST
SMGSVCASTLALLNAGVPLRAPVAGIAMGLVSDQVDGETRYVALTDILGAEDAFGDMDFK
VAGTKDFVTALQLDTKLDGIPSQVLAGALSQAKDARTTILEVMAEAIDTPDEMSPFAPRV
TAIKVPVDKIGEVIGPKGKMINSITEQTGANISIEDDGTVFVGATDGPSAQAAIDMINAI
ANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGSGKRIAKVEDVVNVGSKI
RVEIADIDARGKISLIPVEEGNDEAAAPAADEAASE
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaattccgtagtagaggtcgacgaaggcgtgttcgaatccaccgccgtgatc
gacaacgggtccttcggtacccgtaccatccgtttcgagaccggacgccttgctcagcag
gccgccggcgccgtcgttgcttacctggacgacgagaccatgctgctgtccgccacgagc
gccagcaagcaccccaaggagcacttcgacttcttccccctgacggtggacgtcgaagag
cgtatgtacgcagcgggccgcatccccggttcgttcttccgtcgtgagggacgcccctcc
accgacgcgatcctgacttgccgcctcatcgaccggccgctgcgcccgtccttcgtcgac
ggtctccgtaacgagatccaggtcgtcgtcacggtcatgagcctcaacccgcaggatctg
tacgacgtcgtggccatcaacgccgcttccgcgtcgacgcagatcgcgggcctgccgttc
tccggacccgtcggtggcgtgcgtgttgctctcatcgtctccgaggacaacaaggccggc
cagtgggttgcattcccgacggtcgatcagctcgagaacgccgtcttcgacatggtcgta
gccggccgcgtcgtgtccggcagcggtgacaacgccgacgtagcgatcatgatggtcgag
gccgaggccaccgacaacgtcatcgcgaagatcgccgacggcgctcaggcaccgaccgag
gccatcgttgccgaaggcctcgaggccgccaagccgttcatcgcacgcctgtgcgctgct
caggcagcactggcatccaaggctgcaaagcccacgggtgactacccggtcttcccggcg
taccaggacgacgtttttgctgccgtcgaggctgctgcgtccgaaaagctcaatgccgca
ctgacaatcgccggcaagcaggaacgcgacgacaagaccgacgaggtcaaggtcgaggtt
ctcgagcaggttgcacccaacttcgaaggccgcgagaaggaactgggagcagcgttccgc
tcgctcaccaagaagctggttcgccagcgcatcctgcgcgatcagttccgcatcgacggc
cgcggcgtcacggacatccgttcgctgtccgccgaggtcgcgatcatcccgcgcgcacac
ggctccgcactgttcgagcgcggcgagacccagatcctgggtgttaccactctcgacatg
gtcaagatggctcagcaggtcgactcgctcggtcccgagaccaccaagcgctacatgcat
cattacaacttcccgccgtactccaccggtgagacgggtcgcgtcggttcgccgaagcgt
cgcgaaatcggtcacggtgcactcgccgagcgcgctctcatgccggttctgcccagcgtc
gaagagttcccttacgcgattcgccaggtctccgaggctctgagctccaacggttccacc
tcgatgggctcggtgtgtgcgtccacgctcgcactgctcaacgccggtgtgccgcttcgc
gctccggttgccggtatcgccatgggtctggtctccgaccaggtcgacggtgaaacccgc
tacgtcgctctgaccgacatcctcggcgccgaagacgccttcggcgacatggacttcaag
gtcgcaggcaccaaggacttcgtcacggccctgcagctggacacgaagctcgacggcatc
ccgtcgcaggttcttgccggtgcactctcgcaggcgaaggatgcgcggaccacgatcctc
gaggtcatggcggaagccatcgacaccccggacgagatgagcccgttcgctccccgcgtg
acggccatcaaggtccccgtcgacaagatcggtgaggtcatcggccccaagggcaagatg
atcaactccatcaccgagcagaccggtgccaacatctccatcgaagacgacggcaccgtg
ttcgtcggcgccaccgatggaccgtctgcacaggccgcgatcgacatgatcaacgccatt
gccaacccgcagctccccaaggtcggcgagcggttcctgggcacggtcgtcaagaccacc
gccttcggtgccttcgtttcgctcctgccgggacgcgacggactggtgcacatctcgaag
ctgggcagcggtaagcgcattgccaaggtcgaagacgtggtcaacgtcggatccaagatc
cgcgtcgagatcgccgacatcgatgcacgtggcaagatctcgctgatcccggtcgaagag
ggcaacgacgaggctgccgctccggccgccgacgaggctgcttccgagtag
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