| Entry |
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| Symbol |
hrpA
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| Name |
(GenBank) putative ATP-dependent RNA helicase HrpA
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| KO |
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| Organism |
rer Rhodococcus erythropolis PR4
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| Brite |
KEGG Orthology (KO) [BR:rer00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:rer03019]
RER_27790 (hrpA)
Enzymes [BR:rer01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
RER_27790 (hrpA)
Messenger RNA biogenesis [BR:rer03019]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RER_27790 (hrpA)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(2982504..2986409)
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| AA seq |
1301 aa
MSTTPPAPLSPKRSDLKSALAQVSLRDESRLRRKLDRARTPDALVALAEEIETARTRLAA
RSANVPAVSYPEALPVSQRKDDIATAISENQVVIVAGETGSGKTTQIPKICLELGRGVRG
LIGHTQPRRLAARTVAERIAEELDTELGDAVGYTVRFTDQVSDRTYVKLMTDGILLAEIQ
RDRMLRRYDTLIIDEAHERSLNIDFILGYLAQLLPRRPDLKVIITSATIDPERFAKHFAV
DGKPAPIVEVSGRTFPVEMRYRPLTVESGDITFDRDPVDAVCEAVDELSAEGEGDILVFL
SGEREIRDTADALRDRRLRNTEIVPLYARLSAAEQHKVFSPHTGRRVVLATNVAETSLTV
PGIRYVVDPGTARISRYSVRTKVQRLPIEPISQASARQRSGRCGRVAEGICIRLYSEEDF
ESRPAFTEPEILRTNLASVILQMTALGLGDIAAFPFVEPPDQRAVKDGIGLLEELGAIAR
GSEASHPELTPVGRELAQIPVDPRMARMLVEAKNNGCLHETLVIVAALSIQDVRERPAEF
QQAADEKHARFNVENSDFLAYLKLWDYLREQRNDLSSNQFRKMCRNEFLHWLRIREWQDL
HGQLRQITRGLGWTVGETPASENAIHQSLLAGLLSHIGLREGEKRDYLGARGSHFAIFPG
SGLFKKPPRWVMAAELVETSRLWARMSARIEPEWAEKLAPHLVKRTYSEPHWSSKRGSAM
AYERVTLYGVPLVTGRAVTYSRIDPEASRDLFIRHALVQGEWQTNHKFFHENRALLDNVE
ELENRARRRDILVDDETLYEFYEERIGQEAVSAKHFDQWWKTERRKNPSLLTFTPETVVN
SDAAAVLGGEYPDAWRQGDMQFPLTYQFEPGKDDDGVSAHIPVGLLAQLQPVGFDWLVPG
MRVDLVTALIKTLPKNIRRAVVPAPDYAAAALAAVKPRSEPLMTAMARELSHLGGIQIDA
KDFDPAALPDHLRMTFVVEDESGKVLAKGKDLVQLRSTLAPRVQKEVAKAATGTERAAAT
VWTSETLGALEPTITRSIGGQQVTGYPALVPENGGVAVRVLSTPTAQAQAMREGTRALLL
AAVPTQLKAVTAGLSNTQRLALGQNPDGGLEALVEDCRVAAANEVIAAHGGPVRTPEAFD
ALVKIARSELAGRVSAILRMIVPILEQAHQLSVVLDRSRGEAADDVREQLTSLLFPGFVA
ELGSARLRDLPRYLAAAKFRLEALPASAQRDQQAMDVLDRVYAAYDRLLSSLPEERRTAR
DVDSISWMIEELRVSLFAQSLGTPTPISEKRVLKAIEAIKR |
|---|
| NT seq |
3906 nt +upstreamnt +downstreamnt
atgtctacaacaccaccggccccactctcccccaagcggagtgacctgaagagcgcgctg
gcgcaggtctcactccgcgacgagagtcgactccgtcgcaaactcgaccgtgcccgcaca
ccagacgctttggtggcgctggccgaggaaattgaaacggcgcgcacacggttggcggca
cgatccgccaatgttcccgcagtctcgtatccggaagctctgcccgtcagtcagcgcaag
gacgacatcgcgaccgcaatctcggagaatcaggttgtcatcgtcgccggcgagaccggc
tcgggtaagacaactcagatcccgaagatctgtctcgaactcggacgtggcgtccgcggc
ctgatcggacatacacagcctcgccggctggcagcacgcaccgttgccgaacgtatcgcc
gaagaactcgacaccgaactcggcgacgccgtcggatacaccgtgcggttcaccgaccag
gtctcggaccgcacctacgtcaagctcatgaccgacggcattctcctcgccgaaattcag
cgcgaccgtatgctccgacgctacgacacgctgatcatcgacgaagcgcacgaacgcagc
ctcaacatcgacttcatcctcggttacctggctcagctgctcccccgccgacccgatctc
aaggtcatcatcacgtcggcgaccatcgatcccgaacgcttcgccaagcacttcgctgtc
gacggtaagcccgcgccgatcgtcgaggtatccgggcgaacattccccgtcgaaatgcgt
taccggccactgaccgtcgagtccggcgacatcaccttcgaccgcgatcccgtcgatgcg
gtctgcgaggcggtcgacgagctgagcgcggagggcgaaggcgacatcttggtcttcctc
tccggcgaacgcgaaattcgcgacaccgcagacgctttacgcgatcggcgtcttcgcaac
accgaaatcgtcccgctgtacgcgcgactgtctgctgccgagcaacacaaagtgttctcg
ccgcacaccggccgacgcgtcgtccttgccaccaacgtagccgagacctcgttgaccgtt
cccggcattcggtacgtcgtcgatccgggaaccgcgcgcatttcgcgatattcggtgcgc
accaaggttcagcggttgccgatcgagcccatttcgcaggcgtcagctcgtcagcgttcc
gggcgttgcggccgcgtcgccgaaggaatctgcatccgcctgtattccgaggaggacttc
gagtcacggccggcgttcaccgagccggagatcctgcggaccaatctcgcatccgtcatc
ttgcagatgacggccctcggtctgggcgacatcgccgccttcccctttgtcgaaccgccg
gaccagcgcgccgtcaaggacggaatcggactgctcgaagaactcggcgccatcgcgcga
ggttccgaggcaagccaccccgaactgacgccggtcggccgcgagctggcccagattccg
gtggatccgcggatggcacgaatgctggtggaagccaagaacaacggttgccttcacgaa
acccttgtcatcgtcgcggcgttgtccatccaggacgttcgcgaacggcccgccgagttc
cagcaagccgccgacgaaaagcacgccaggttcaatgtcgagaactccgacttcctggca
tacctgaaactgtgggactacttacgcgaacaacgtaacgacctgtcctccaaccagttt
cgcaagatgtgccggaacgagttcctgcactggctccgcatccgcgaatggcaggatctg
cacgggcaactccggcagatcacccgcggcctcggctggacggtgggtgagacacccgca
agcgagaacgcgatccatcagtcactcctcgccggtttgctctcacacatcgggctacgc
gagggcgagaagcgggactacctgggcgccaggggcagccacttcgcaattttccccgga
tcgggacttttcaagaagccaccacgctgggtcatggccgccgaactcgtggaaacgtcg
aggctgtgggcgcgcatgtccgcgcgcatcgaacctgagtgggctgaaaaactcgcccct
cacctggtgaaacgcacctattccgaaccgcactggtcctccaagcgcggctcggcgatg
gcatacgagcgggtcactctctacggagttcccctggtgacgggccgcgcagtgacgtac
tcacgaatcgatcccgaggcctctcgcgatctcttcatccgccatgcgctcgtgcagggc
gaatggcagacaaaccacaagttcttccacgagaaccgcgcactcctcgacaacgtcgag
gaactcgagaaccgtgcgcgccgccgcgacatcctcgtcgacgacgaaactctctacgag
ttctacgaagaacgtatcggccaggaagccgtatccgccaagcatttcgaccagtggtgg
aagactgagcggcgcaagaatccgagtctgctgactttcacgccggaaacggtggtcaac
tccgacgcggctgcagtactgggcggcgagtacccggacgcctggcgccagggcgacatg
cagtttccactcacttaccaattcgagcccggaaaggacgacgacggcgtcagcgcgcac
atcccggtcggcctgcttgcgcaacttcagccggtcggcttcgactggttggtccccggt
atgcgcgtcgatctggttactgctctgatcaagacgttgcccaagaacatccgacgcgcc
gtcgtgcccgcacccgactacgccgccgcagcattggcagcagtcaaacctcgatccgag
ccgttgatgaccgcaatggcccgcgaactctcgcacttgggcgggatccagatcgacgcc
aaggacttcgatcccgccgcgctgcccgaccatcttcggatgacatttgtcgtcgaggac
gaatcgggcaaggttctcgcgaagggtaaggatctggtgcagctacgaagcacgctcgcc
ccgcgcgtacagaaagaagtggccaaggcggcaaccggtaccgaacgagcagcggcaacc
gtctggacatccgaaacgctcggcgcactggaaccgaccatcactcgctccatcggcgga
cagcaggtaaccggctacccagcgctggtgccggaaaacggtggagttgccgttcgtgtc
ctgagtacgccgactgcgcaggcgcaggcgatgcgggaaggcactcgggcgcttcttctc
gcggccgttcccacccagctcaaggccgtgaccgccggcttgtcgaacactcagcgtctg
gctctcggccagaatccggacggcggcttggaggccctcgtcgaagattgccgggtggca
gctgccaacgaagtgatagctgcccacggcggaccggtacgcacgcctgaggcgttcgac
gccctggtgaagatcgcacgctccgaactggccggacgcgtctccgcgatcctgcgcatg
attgttccgatcctcgaacaagcacaccaactgagcgtcgttctggaccgctcccgcggc
gaagcagcagacgacgtccgagaacagttgacctcactgctgtttccgggatttgtcgcc
gaattgggctcggcccgcctacgcgatttgccgcggtatcttgccgcagcaaaattccgt
ctcgaagctctacccgcaagtgcacaacgagatcagcaggcgatggacgtcctcgaccgg
gtgtacgcagcgtacgaccggttgttgagttcacttcccgaagagcgtcgcactgctcga
gatgtcgactcgatcagctggatgatcgaagaactgcgcgtgagcctgtttgcgcagtcc
ctcggtacacccacaccgatttccgaaaagcgagtcctgaaagctatcgaagcgatcaag
cgttga |
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