Rhodococcus erythropolis PR4: RER_28160
Help
Entry
RER_28160 CDS
T00881
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
rer
Rhodococcus erythropolis PR4
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RER_28160 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rer03021
]
RER_28160 (sigA)
Transcription machinery [BR:
rer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RER_28160 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Extensin_1
HTH_20
Motif
Other DBs
NCBI-ProteinID:
BAH33524
UniProt:
C0ZYT9
LinkDB
All DBs
Position
complement(3022494..3023852)
Genome browser
AA seq
452 aa
AA seq
DB search
MAATDTRQTADSPSESEPQSPAVEAATVTAPAAKKAPAKKAPAKKAAAKKAPAKKAPAKK
AAAKKASPKKAGDPDAEDGDVELEDIDITDGDLAEVESDVVEVVAVGEDEETAAEPSEKD
KASGDFVWDEEESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAG
LYAVQIMQDLADKGEKLPAAQRRDMSWICRDGNRAKNHLLEANLRLVVSLAKRYTGRGMA
FLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVI
NKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLG
DFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVY
GVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccaccgatacacgtcagactgctgattctccatcagagtcagagccacaatct
ccagccgtggaggcggccaccgtcaccgctccggcagccaagaaggctccggcgaaaaag
gctcccgccaagaaggcagcagcaaagaaggctccggccaagaaagctccggccaagaag
gcagcagctaagaaggccagccccaagaaggccggcgatcctgatgccgaagacggcgat
gtcgagttggaagacatcgacatcacggacggcgaccttgccgaggtcgagtccgatgtc
gtcgaggtcgtagcagtcggcgaagacgaagagaccgctgcagagccgtccgagaaggac
aaggcttccggcgacttcgtctgggacgaggaagagtccgaggctcttcgccaggcacgc
aaggacgccgaactgacggcgtccgccgactcggttcgcgcttacctcaagcagatcggc
aaggtcgcactcctcaacgccgaagaggaagtcgaactggccaagcgcatcgaggccggc
ctctacgccgtgcagatcatgcaggatcttgctgacaagggcgagaagttgcctgcagct
cagcgacgcgacatgagctggatctgccgcgacggcaaccgcgccaagaaccacctcctc
gaggccaaccttcgcctggtcgtctcgctggccaagcgctacacgggccgcggcatggcg
ttcctggacctcatccaggaaggcaacctcggtctgatccgtgcagtcgagaagttcgac
tacaccaagggttacaagttctcgacctacgccacgtggtggatccgtcaggccatcacc
cgcgcaatggccgaccaggctcgcaccatccgcatcccggtgcacatggtcgaggtcatc
aacaagctcggccgtatccagcgtgagctgctccaggacctgggccgtgagcccacgccg
gaagagcttgccaaggaaatggacatcacgccggagaaggtgctggaaatccagcagtac
gcgcgtgagccgatctctctcgaccagaccatcggcgacgagggcgacagccagctcggt
gacttcatcgaggactccgaagctgttgtcgcagtcgacgccgtctcgttcaccttgctg
caggatcagctgcagtcggtactcgagacgctgtccgagcgcgaagccggcgtggttcgc
ctccgcttcggcctcaccgacggccagccgaggactttagacgaaatcggacaggtctac
ggcgtcacgcgtgagcgtatccgtcagatcgaatcgaagacgatgtcgaagctgcgccac
ccgtcgcgttcgcaggttctgcgcgactacctcgactag
DBGET
integrated database retrieval system
