Rhodococcus erythropolis PR4: RER_28440
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Entry
RER_28440 CDS
T00881
Symbol
rnd
Name
(GenBank) putative ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rer
Rhodococcus erythropolis PR4
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rer03016
]
RER_28440 (rnd)
Enzymes [BR:
rer01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RER_28440 (rnd)
Transfer RNA biogenesis [BR:
rer03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RER_28440 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BAH33552
UniProt:
C0ZYW7
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All DBs
Position
complement(3052784..3054073)
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AA seq
429 aa
AA seq
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MSEVTDDATEPTSDVVPLLVPRDGVPDVITTAAGVADAAAALASGHGPLAVDAERASGFR
YSARAYLIQLRREGAGSFLLDPIPTAQDLQPLAEAINPLQWVLHSADQDLPGLAELGLTP
AELFDTELAGRLAGFERVGLAAIVERTLRVELRKGHGAADWSTRPLPDAWLNYAALDVEV
LLELRDAMEAELESQGKLEWAKEEFEYIRLAGPPKPKPDRWRRTSHITSLKTTRQLAAVR
ALWQAREDLARKRDVSPSRVLPDSAIIDAALKDPQSLDALRSLPVFGGPRQRRYSRVWMD
ALEAARRLPDSELPPKTPPIVGPPAAGRWARQDPAAADRLTAARAALSDLSKEVSVPVEN
LLQPDLVRRLCWDWKLEPDSDITEVESAIETKLTSGGARGWQRTLTVPVLAEALNSVVPA
EPEAEEPES
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagtcaccgatgatgcaaccgagcccacctccgacgtagttccgctgctcgtt
ccgcgtgacggagttccggacgtcatcaccacagccgccggtgtcgccgacgccgcggcc
gcgctggcctccggccacggcccgctcgccgtggacgccgagcgggcatccggattccgt
tattcggcacgggcgtacctgatccagctccgacgcgaaggagcgggatcgttcctgctc
gacccgattccgacagcgcaggacctgcagccgttggccgaggcgatcaacccgttgcaa
tgggtgctgcactcggccgatcaggatctccccggcctcgccgaactgggcctgacaccg
gccgagctgttcgacaccgaactggccggtcgactggccgggttcgaacgagtcggactc
gccgcgatagtggaacgaacccttcgggtggaacttcgcaaaggtcacggggccgcggac
tggtcgacacgtccgctgccggacgcctggttgaactacgccgccctcgacgtcgaagtg
cttctcgaactgcgcgacgccatggaagccgaactcgaatcccagggcaagctcgagtgg
gcgaaggaggagttcgagtacatccgtctggccggcccgcccaagcccaagcccgaccgt
tggcgtcgtacatcgcacatcacctcgctcaagaccactcggcagttggcggcagtacgg
gcgctgtggcaggcgcgtgaggatctcgcgcgcaagcgcgacgtgtcgccgagccgggtt
ctccctgactccgccatcatcgacgccgctctcaaagatcctcagtcgctggatgcgctc
cgttcgcttcccgtgttcggcggaccacgtcaacgccggtattcgcgtgtgtggatggac
gcgctggaagctgcgcgcaggctcccggacagcgagcttccgccgaagaccccgccgatc
gtcggaccccctgccgccggtcggtgggctcgccaggacccggcggcggccgatcgactg
acggcggctcgggcagcactgtcggacctgagcaaggaagtgtcggtgcccgtggagaat
ctgctccaacccgacctggtcaggcgcctgtgctgggactggaagttggaacccgactcc
gacatcaccgaggtcgagagtgcaatcgagaccaagctcacttccggtggcgcacgtggc
tggcaacgcactttgacggttcccgtcctcgccgaggcactgaactccgtggtcccggcc
gagcccgaagcggaagagcctgaatcctga
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