Rhodococcus erythropolis PR4: RER_31660
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Entry
RER_31660 CDS
T00881
Name
(GenBank) putative helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
rer
Rhodococcus erythropolis PR4
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rer03019
]
RER_31660
Enzymes [BR:
rer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
RER_31660
Messenger RNA biogenesis [BR:
rer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RER_31660
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
DMP19
Motif
Other DBs
NCBI-ProteinID:
BAH33874
UniProt:
C0ZZT9
LinkDB
All DBs
Position
complement(3429441..3432158)
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AA seq
905 aa
AA seq
DB search
MVMNKSELSTFASSLKFELDPFQVKACVALEAGHGVLVCAPTGAGKTVVGEFAVHLALAA
GRKCFYTTPIKALSNQKYAELVERYGPSEVGLLTGDSSINSDAPVVVMTTEVLRNMLYAN
SEALRGLSHVVMDEVHYLADRFRGAVWEEVILHLSEDVRLVSLSATVSNAEEFGSWMETV
RGDTTVVVDETRPIPLWQHIMVGRRIFDLFDSRSHPAAGPKTVLVDQDLVRHVKQRQALE
RVESWQPRGRGRRGSYQSSNDFRPLPRPDVIAQLDQSGLLPAITFIFSRAGCDAALAQCL
RSRLDLTSPEQVREIDTIIEKHTGELPEEDLEVLGYRDWCKALRRGLASHHAGMLPAFRQ
TVEELFVKGLVRAVFATETLALGINMPARTVVLERLVKYNGESHAELTPGEYTQLTGRAG
RRGIDVEGHAVVLWQPGVEPTDVAGLASTRTFPLRSSFRPSYNMSINLVERMGAADSRKL
LERSFAQFQADRSVVGLVRGIERNEEALKGLQEKLGGADGEYFEYASLRERLSARERALE
RKGREDRRGDAVESLRALARGDVIAIPIGRHSGVAVVLVPDNDPKDPRPLVLTADQWAGR
LSSGDFPEAADVLGKMRLPKHVDHHTARIRRDLASALRSTGISAPRRKKRHKAGASEDAE
VATLRRAIRSHPCHSWPDREHLSRIGERYNRLARETQSMREKAAATTNSLARTFDRIIAL
LKEREYMTAEAAPEVTESGRRLSRIYSESDLLVAECLRTGAWTGLSPAELAAVVSSVVYE
SRRDGDTVDRVPTAALRHALNDTQRLWSELRSDEIRHKLPPTREPDLGFVTAVYHWASEN
SLVDALIAAGVQGRALSAGDFVRWCRQVIDLLDQVRLTSTDADVAKTAARAVAAIRRGVV
AVDAA
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
gtggttatgaacaagagtgaactgagcacgtttgcgtccagcctgaagttcgaactcgat
ccattccaggtgaaggcatgcgttgcgctcgaagccggccacggagtccttgtctgcgcg
ccgaccggcgcaggcaagaccgtggtcggcgagttcgctgtccacctggctctcgcggcg
ggccgcaagtgtttctacacgacgccgatcaaggcgttgagtaatcagaagtacgcagaa
ctcgtcgagcggtacggcccgagcgaggtcggcctgctgacgggtgattcgagtatcaac
tccgacgcaccggtggtcgtcatgaccactgaagtcctgcggaacatgctctacgcaaat
tccgaggcactgcgcgggctttcgcacgtagtcatggacgaagtgcactacctggcggac
cggttccgtggtgcggtgtgggaggaagtgatcctgcacctgtccgaggatgttcggctg
gtgagtttgtcggcgaccgtgagcaatgccgaagaattcggctcctggatggaaaccgtc
cgcggcgacaccaccgtggtcgtcgacgagacgcggccgatcccgctgtggcagcacatc
atggtcggtcgacggatcttcgatctcttcgacagccgcagtcatcctgcggctgggccg
aagaccgtgctcgtcgaccaggatctggttcgccacgtcaagcagcgtcaggctctcgaa
cgcgtcgagagctggcagccgcgtggccgcgggcgtcgtggcagctaccagagttccaac
gatttccgacccttgccacgacctgacgtcatcgcgcagctggaccagtccggactgctc
ccggccatcaccttcatcttcagccgcgccggttgtgatgcggctcttgcacagtgcctg
cggtcccgactggatctgacttctccggagcaggttcgcgagatcgacaccatcatcgag
aaacacaccggggaactacccgaggaggatctcgaagttctcggatatcgggactggtgc
aaggcactgcgacgcggactggcctctcaccatgccggcatgttgccggcatttcgccag
acagtcgaggaactgttcgtcaaaggtctcgtgcgggcggtcttcgcgaccgagacgctg
gccctcggcatcaacatgccggcacgcacggtggtcctcgaacgtctggtcaagtacaac
ggtgaatcgcatgccgaactgacaccgggggagtacacgcagctgaccggtcgggcaggc
cgacgcggcatcgacgtcgaagggcacgctgtggtcctgtggcagccaggggtcgagccc
acggatgtcgccggcttggcgtcgacccggactttcccgctccgcagttcgttccgcccc
tcgtacaacatgtcgatcaacctcgtcgaacgcatgggcgcggccgattcacggaagctg
ctcgagcgttccttcgcacaattccaagcggatcgctcggtggtcggcctggtgcgtggc
atcgagcggaacgaagaagccctgaagggtttgcaggagaaactcggcggtgcggacggc
gaatacttcgaatacgcgtcgttgcgtgagcggctcagtgcgcgcgagcgcgcgctcgaa
cgtaagggccgcgaagatcgacgcggagatgcggtggagtccctccgtgcactcgcccgc
ggtgacgtgatcgcaattcccatcggtcgtcattccggggtggcagtggtcctcgtcccg
gacaacgatccgaaggacccgcgtccgctggttctgactgccgatcagtgggccggccga
ctctcctcgggtgatttcccggaagcagccgacgttctgggaaagatgcgcctgcccaag
catgtcgatcaccacaccgcaaggatccggcgcgatctggcctcggcattgcgtagtacc
gggatcagtgccccccggcggaagaagcgccacaaggcgggcgcgtccgaagacgccgag
gtcgctactttgcgacgcgctattcgctcgcatccgtgccacagctggcccgatcgtgaa
catctgagccggatcggtgagcgctacaaccgactggcccgggaaacgcagtcgatgagg
gaaaaggcagcggccaccaccaactcgttggcgcggacgttcgaccgcatcattgcgcta
ctcaaagagcgtgaatacatgactgccgaagcagcgcccgaagtcaccgaatccggacga
cgactcagccgcatctactccgaaagcgaccttctggtcgccgagtgcctgcggaccggg
gcgtggacaggtctcagcccggccgagttggcggccgtcgtctcctcggtggtctacgaa
tcacgtcgggacggcgacaccgttgatcgggtgccgacagcggcgcttcgtcacgccctc
aacgacactcaacgattgtggagcgaactgcggtcggacgagattcgtcacaagctgccg
ccgacgcgggaaccggatctcggattcgtcaccgccgtttatcactgggcgagtgagaac
tcgcttgtcgacgcactgatcgcggccggagtgcagggccgtgcgttgtctgcgggtgac
tttgtacgttggtgtcgtcaggtgatcgatctcctcgatcaggtccgcctgacatcgacg
gatgccgacgtcgcgaagactgcggcgcgggcggtagctgcaattcgtcgcggggtagtt
gctgtcgacgcagcatga
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