Rhodococcus erythropolis PR4: RER_35380
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Entry
RER_35380 CDS
T00881
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer00250
Alanine, aspartate and glutamate metabolism
rer00410
beta-Alanine metabolism
rer00430
Taurine and hypotaurine metabolism
rer00650
Butanoate metabolism
rer01100
Metabolic pathways
rer01110
Biosynthesis of secondary metabolites
rer01120
Microbial metabolism in diverse environments
rer02024
Quorum sensing
Module
rer_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RER_35380
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RER_35380
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RER_35380
00430 Taurine and hypotaurine metabolism
RER_35380
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RER_35380
Enzymes [BR:
rer01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
RER_35380
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
SAM_1
Motif
Other DBs
NCBI-ProteinID:
BAH34246
UniProt:
C1A0W1
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All DBs
Position
3879068..3880459
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AA seq
463 aa
AA seq
DB search
MPEPRRSDHTDYVAVNPIFSRPGEDSVASKYTLEPDGMLPETAYQIVHDETMLDGNARLN
LATFVSTWMDDHATKLYTESFDKNMIDKDEYPQTAAIETYCWRILADLWHSPSPKDAIGT
STIGSSEACMLGGLAMKRRWQHARKAAGKSTEKPNLIMSSAVQVCWEKFCNYWDVEARYV
PISEEHRTLDGHDLDKYVDENTIGVIAIMGVTYTGMYEPVLEISKALDAIQEKTGLDVPI
HVDGASGAMIAPFLQPELEWDFRLPRVHSINTSAHKYGLVYPGLGWVVWRSQDLLPDDLV
FKVSYLGGSMPTFALNFSRPGAQVILQFYLFLRLGHDGYRAIQQSSQDVAKFLAEGIGKL
DAFELWNDGSDIPVFAWRLAEGHTSNWTLYDLSDRLRGKGWLVPAYPMPDDLADLTVQRI
VVRNGLSMDLAANLLRIIEEETAFLDELDSPMPRPRVTEGFHH
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacccagaaggtcagatcacaccgattacgtagccgtcaatccgatcttctcg
aggcccggcgaggattcggttgcatcgaagtacacactcgaacccgacggcatgcttccc
gagaccgcctatcagatcgtccacgacgaaacgatgctcgacggcaatgcgcggctcaat
ctcgcgacgttcgtcagcacgtggatggacgaccacgccaccaagctgtataccgagtcg
ttcgacaagaacatgatcgacaaggacgagtatccacagaccgccgcgatcgaaacctat
tgctggcgcatccttgccgacctctggcactcgccctcccccaaggacgcaatcggtacc
tcgacgatcggttcgtccgaagcgtgcatgctcggtggcctggcgatgaaacggcgctgg
cagcacgcacgaaaagccgcggggaagtccaccgaaaaaccaaatctcatcatgagttcc
gccgtccaggtgtgctgggagaaattctgcaactactgggacgtcgaggcgcgctacgtg
ccgatcagcgaggaacaccggaccctcgacggtcacgatctggacaagtacgtcgacgag
aacacgatcggcgtaatcgcgatcatgggtgtcacgtacaccgggatgtacgagccggtc
ctggaaatctcgaaggcactcgacgcgatccaggaaaagacgggactcgacgttcccatc
cacgtcgacggcgcttccggcgcaatgatcgccccgttcctacagccggaactcgaatgg
gatttccggctcccgcgcgtgcactccatcaacacctcggcgcacaagtacggactcgtc
tatcccggcctcggctgggtggtgtggcggtctcaggatctgcttcccgacgacctcgtg
ttcaaggtgagctacctcggcggcagtatgccgaccttcgcgctgaacttctcgcggccc
ggcgctcaggtgatcctgcagttctacttgttcctgcgtctcggccacgacggctatcgc
gcgatccagcagtcctcacaggacgtggcgaaattcctcgccgaaggaatcgggaaactg
gacgccttcgaactgtggaacgacggttccgacatcccggtcttcgcgtggcgcctcgcc
gagggccacacgtccaactggacgctgtacgacctgtccgaccgactgcggggcaagggc
tggttggtgccggcctatcccatgccggacgatctcgcggatctgacagtgcagcgcatc
gtggttcgtaacggactgagcatggacctggcagccaatctgctgcgcatcatcgaagag
gaaaccgcgttcctcgacgaactcgacagcccgatgccgcggccacgcgtcaccgaggga
ttccatcactga
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