Rhodococcus erythropolis PR4: RER_35540
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Entry
RER_35540 CDS
T00881
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer00470
D-Amino acid metabolism
rer00550
Peptidoglycan biosynthesis
rer01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RER_35540 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RER_35540 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rer01011
]
RER_35540 (murD)
Enzymes [BR:
rer01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RER_35540 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rer01011
]
Precursor biosynthesis
Amino acid ligase
RER_35540 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
BAH34262
UniProt:
C1A0X7
LinkDB
All DBs
Position
complement(3896925..3898448)
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AA seq
507 aa
AA seq
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MTSSADSENDLSWLRGTRVLVAGGRVSGQATIEPLVALGAVVTVADSTLDFAQRCAELGA
DMVTTTSIEDAPDSITEYGLVVTSPGFRPDAPILAAAAGHGIPIWGDVEFSWRVDHSGHF
GGPRKWLVVTGTNGKTTTTSMLASILDAAGVVGRACGNIGLPILDALAETSPRVEYLAVE
LSSFQLHWAPSVRPDAGVVLNVAEDHLDWHGGMSAYAEAKSRALSGKVAVVGLDDAIASE
LGTRATADIVTGFRLGEPGEGELGVEAGHLVDNAFGDHVRLAEAASIDPAGPAGVMDALA
AAALARALGFEADVVERGLAAHKVGPHRGALVGRVGSVVYIDDSKATNPHAARPSILAHD
RVVWVAGGLLKGASVEQLVSEVGPRLSGAVLLGRDAGVIEDALARHAPDVPVVHVLSGDD
EAVSENSSNSTLTIRLPSGADADAVMAAVVVEAAELASPGDAVVLAPAAASLDMFASYGH
RGDSFTAAVAALPDPFTDSPGQAGNLL
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaccagctcagcggattccgagaacgacctgtcctggctccgcggtacgcgagtgctg
gtcgccggtgggcgggtgtccggtcaagcgaccatcgaacctctcgtcgcgctcggcgct
gtcgtgacggtcgccgattcgaccctcgacttcgcgcagcgctgcgccgaactcggcgcg
gatatggtgaccaccacctcgatcgaggatgccccggattcgatcaccgagtacgggctc
gtcgtcaccagtccgggctttcggccggacgcaccgatccttgcagcggccgccggtcac
gggattcccatctggggagacgtcgagttctcgtggcgcgtcgaccacagcggacacttc
ggcggaccccgtaaatggctcgtcgtgacggggacgaacggaaagaccacgacgacgtcg
atgctggcctcgattctcgacgccgccggagttgtcggccgagcctgcgggaacatcggg
cttccgatactcgacgcactcgccgagacgtcgccgcgcgtggagtacctcgctgtcgaa
ctgtcgtctttccaattgcactgggcaccttcggtgcgtccggatgccggcgtggtcctc
aatgtcgccgaggatcacctcgactggcacggcggaatgagcgcgtacgccgaggccaag
tcgcgggcgctgagtggaaaggtcgcggtggtcggcctcgatgacgcaatcgcttccgaa
ctgggaactcgcgcaactgcagacattgtcaccgggttcagattgggtgaaccgggcgaa
ggagaactgggtgtcgaagcggggcacctcgtggacaacgctttcggcgatcacgtccgc
ttggccgaagcagcttccatagatccggccggcccggcaggcgtcatggacgcgctggcc
gctgccgctttggcgcgggcactcggattcgaggccgacgtcgtcgaacgcggtctggcc
gcacacaaggtcggcccacaccgaggggccctggtcggtcgtgtcgggtccgttgtgtac
atcgacgattccaaggccaccaatccgcacgcagccaggccgtcgatactcgcgcacgac
cgcgtcgtctgggttgcaggcggtctgctcaagggcgcaagcgtcgagcagttggtgagc
gaagtgggaccgagactgtccggcgccgttcttctcggccgtgacgccggtgtgatcgag
gacgcgctggcgcgacacgcgcccgatgttcccgtggtgcacgtgctgtcgggggacgat
gaagcggtgagcgaaaacagcagcaactcgactctcaccatccggctgccgtcgggtgcc
gacgcggatgccgtcatggccgcagtggtcgtcgaagctgccgagttggcgtccccaggt
gatgcagttgtacttgccccggccgccgcgtccttggacatgttcgccagctacggacat
cgtggtgacagtttcaccgccgccgtagccgcattacccgatccgttcacggattcgcct
ggccaagccgggaacttgctatga
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