Rhodococcus erythropolis PR4: RER_35910
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Entry
RER_35910 CDS
T00881
Symbol
dnaQ
Name
(GenBank) putative DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer03030
DNA replication
rer03430
Mismatch repair
rer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RER_35910 (dnaQ)
03430 Mismatch repair
RER_35910 (dnaQ)
03440 Homologous recombination
RER_35910 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rer03032
]
RER_35910 (dnaQ)
03400 DNA repair and recombination proteins [BR:
rer03400
]
RER_35910 (dnaQ)
Enzymes [BR:
rer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RER_35910 (dnaQ)
DNA replication proteins [BR:
rer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RER_35910 (dnaQ)
DNA repair and recombination proteins [BR:
rer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RER_35910 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
BAH34299
UniProt:
C1A114
LinkDB
All DBs
Position
3936062..3937822
Genome browser
AA seq
586 aa
AA seq
DB search
MSPASAREFPSPSPFCDGEKFDVGRQLSFDELDTPLSETTFVVVDLETTGGSADQDSITE
IGAVKIRGGEVLGEMATLVDPGRSIPPYIVELTGITTAMLIGAPPIERVLPAFLEFAEGA
VLVAHNAPFDIGFLKAAASRSARPWPSFRVLCTVKLARRVLTRDEAPSVKLSALAHLFQV
TTQPTHRALDDARATVDVLHGLIDRVGNQGVHSYSELVDYLPNISSHQRAKRSFAANLPR
SPGVYLFRGPSDEALYIGTATDLRRRVRNYFTGSETRGRMKEMVALATRVDHVECAHALE
AGVRELRLLSAHAPPYNRRSKFPKRGWWITLTDEAFPRLSVVRTPTADSIGPFTSRGDAV
EVADTVAEFSRLRTCTKRLGRGAVHGPDCPARELGACPASWAPELTAQDYAAAPETVRGF
FRGTNDAPLQQMQARIDELSEHALFENAARLRDRTVAVSTAVRRTQRLAAVAAIEQLILA
RPTGDGGWELSVIRSGRLASAGLARRGTHPMPVVDAITAAAETVLPDDAPFRGASPEELG
LIARWLASDGVRIVSATSGYVEPAGGAGKWEAWCRLARAGTESEHR
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcccgcctcggcccgagaatttccgtctccgtccccgttctgcgacggggagaag
ttcgacgtcgggcggcaactgagcttcgacgagctggacacaccgctgagcgaaacgacg
tttgtcgtcgtcgacctcgagaccacaggtggaagcgccgaccaggactccatcaccgag
atcggcgccgtcaagatccgcggtggcgaagtgctcggtgaaatggcaacactcgtcgat
cccggccgatcgattccgccgtacatcgtcgaactgaccggaatcaccaccgccatgctg
atcggcgcacctcccatcgaacgtgtcctacccgcttttctcgaattcgccgagggtgcg
gtgctggtggcacacaacgcgcccttcgacatcggcttcctcaaagcagcggcgtcacgc
agcgcacgcccgtggccgtcgttccgtgtgctgtgcactgtgaagctcgccagacgcgtg
ctcacccgcgacgaggcgccttcggtcaaactctccgcactcgcccatctcttccaggtg
accacccaaccgacgcaccgcgcgctcgacgacgcgcgtgcgaccgtcgacgtcctacac
gggttgatcgacagagtcgggaaccaaggcgtccacagttacagcgaactcgtcgactac
ctgcccaacatttcctcacatcagcgggccaaacggtccttcgccgcaaacctgccgcga
agcccgggtgtctaccttttccgaggcccttcggacgaagccctctatataggaactgct
accgaccttcgacgccgcgtccgcaactacttcaccggttcggagacccgcggccggatg
aaggaaatggtcgcgctcgccacccgtgtggaccacgtcgagtgcgcccatgcgctcgag
gcaggggtgcgtgaactacgactactgagcgcgcatgcacccccgtacaaccgtcgctcc
aaattccccaaaagaggatggtggatcactctcaccgacgaggcgtttcccagactgtcc
gtggttcgcacgcctacggccgattcgatcggcccgttcacctctcgcggcgacgcagtc
gaagtcgccgacaccgtcgcagagttcagccgcctacgcacgtgcaccaaacgtctcggg
cgcggcgccgttcacggccctgactgccccgctcgcgaactgggggcgtgtcccgcctcc
tgggcaccggaactcactgcgcaggactacgcggccgcccctgagactgtgcgtggattc
ttccggggaaccaacgacgctcccctccaacaaatgcaggcgcgaatagacgagctgtcc
gaacacgcgttgttcgagaatgctgctcgtctgcgtgaccgaacggtcgcagtctctacc
gcagtgcggcgcactcagcgacttgcagcagtcgcggcgatcgaacaactgattctcgcc
cgtcccaccggggacggcggctgggagctgtcggtgatccgttccggacgtctcgcgtcc
gccgggctcgccagacgtggaactcacccgatgcccgtcgtcgacgccatcaccgcggca
gccgaaaccgtcctaccggacgacgcaccgttccgcggcgcgtcacccgaagaactgggc
ctgatcgcacggtggctcgcatcggacggtgtccgaatcgtgtcggcgacatccggctac
gtcgaacctgcgggcggcgccggcaagtgggaagcctggtgccgactcgcgcgggccggt
accgaatccgaacatcgatga
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