Rhodococcus erythropolis PR4: RER_38400
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Entry
RER_38400 CDS
T00881
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RER_38400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5979
Big_8
DUF7601
Gram_pos_anchor
Candida_ALS_N
DUF5666
Motif
Other DBs
NCBI-ProteinID:
BAH34548
UniProt:
C1A1R3
LinkDB
All DBs
Position
4199193..4203800
Genome browser
AA seq
1535 aa
AA seq
DB search
MIVAVLALVISSFSFVQVASADDIGTSTTTVPTTTVPTTTKPPATTTEAPLKTTAPPTST
SESPTSAKPPITSTAPPSTTSVAAQRLAARGVNPGIDVKITDVQVEGKNGQQITVGDSVT
VKGTWDASSASPQPGDQFTIEFPGELKLQSNPTIALEGDDGTVWGTCDLAASTNLMTCVL
SDAVADRPDEVKGDFFVYTKAVEYTTSETVDFTINNKVTPVDLPGTGGITDGRVIGESTK
SGKLQDNKQSVRWTIDIPGADLAKLDAGNTGSVTLSDKLSDNMEVCAGSLLNAKLWSGRP
GDLKETPGGVTVAQAAAGDQVTININNGAPFEGNKLYRIEYTSCTTSGVVDLKGTQYTNS
VTIGDNTVASDGVGQDYAPQTEPWKGGYLDGGKRNMEAVWTIVVPGTDIAANNHKIDITD
TFGGPHAVCASGVQVVIEKSDYLPGRENEPNYRTPAAGFTIAPIGAVAGASTFTAAITVD
NPDTFNEEQYYYVTYRTCLTTTEVPDSEDHLTNSAVVNKTSITGKTEGPGFTSGKNGAIN
TTSQTVGGVEQPAGTTLNWTVEISGHDLEGLTEPAVINDRFSPNMTVCEIGGDLKSNLNL
KVVAQDFFDGNKKRDITDATSVARADGGFDLTLPRDADGYSRQTKYLVSYTLCTSSGGLD
QRDTEYANTLTYAGKQTLSQSVKQEWGGGGTGQGVSRGSFSLLKEIAPFSEKFPQDTEFT
VKVEEFAPGQIPATDAPVSSYEIKVKADGTPVSGINPRGTGWQIRLSEINLPTVDGVYFE
RGTFRPSEGVTLNGDRTEALVTITPKSNVGVTLLNKASLGSARITKSVIGDGARTGLEAF
VVNAEIAFGDDAAGNELRQFTLKDGQHYDLGKLPIGAKVTFTEVQPMNTDLVTWSEPVIN
PKMLTIGIDASANTVSVTNEAKITQGTFEVSKKLTGPKAFDKAVPASFDVIATWLDTDDK
PQSKTLSLPSDGTAVPFGENLPGGTEVTLTELVPANGDGLAYGVPAYSGNVRINPDNAAV
VTIGKDLRKIEVSNFVDVNDGTLRIAKQVGGEAAEAIGDDVEFTVEARWRDGVEYRTQVL
SVKQGQTTPLGVDLPVGTEVTFTETGRPDVDGVEWGTISWGTSPEGESWLHSNLDGTATG
IVSDDPTDGRLITLSNEALWKFGSVEFTKFILDADGNPVRAPEADLPDSTKFEVRIDGID
PALPAGTDFPAVGQTITLDAGNDWSWTSDEVVPRNTVITFSEVDPKPLAGIDWARPYYYV
SADAGDAEYRDTVKAVAGEKAVVEIHNRPIPTTEVDIDKIVTGPKGSQVAKDGSTIFQVT
ATWTDIDNEARSCVLDVRPGASVTPTAQCDAAVIDGRVQFPLNTDITFTETGAHTDVTNV
KWGEVIWGVKEGKADVSNIDGQPTATSVKLTGEANKSVVLGLENKTSSNGLIIIPIPIPL
PPWEIPTWPGSEVPGGPGTDVSTPGNNTPGNNGGGHNGAPGTPAPGNPAQAKPDQSSSLP
VTGANVIWLAGLALALIGGGAWLTLRNRKRAPGQE
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atgattgttgcggtcctggcgctggtcatatcgtcgttctcattcgtccaagttgcctcg
gcagatgacatcgggacctcgaccaccacagttccgaccaccacagttccgaccacaacg
aagccgcccgcgactacgacggaggcgccactgaaaacgacggcgccgcctacttccacg
tcggagtcacccacttctgcgaaaccgccgatcacatccacagcgcccccgtctacgact
tctgtggcggcgcagcgactggccgcacgcggagtcaatcccggcatcgatgtgaaaatc
accgacgtccaggtcgagggaaagaacggccagcagattacggtcggggactccgtcacc
gtgaagggcacttgggacgcgtcaagcgcgagcccgcagccgggcgaccagttcaccatt
gaattccctggcgagctgaagcttcagtccaacccgacgatcgcgctggagggcgacgat
gggacggtttggggcacatgcgatctggctgcttccaccaatctcatgacctgcgtgctc
tccgacgctgtggcggatcggccggacgaggtgaagggcgatttcttcgtctacacgaag
gcagtcgagtacaccacgtcagagactgtggatttcacgatcaacaacaaggtcacgccg
gtcgacctgcccggcacgggcggcatcaccgacggccgcgtaatcggcgagtcgacgaag
tccggcaaactccaggacaacaagcagtcagtgcggtggaccatcgacatccccggcgcc
gatctggccaagttggacgcaggcaacaccggttcggtgaccctgagcgacaagctctcc
gacaacatggaggtgtgtgcaggcagcctgctcaacgcgaagctgtggtccggtcgcccg
ggcgatctcaaagagacccccggcggcgtcaccgtcgctcaagccgccgcgggtgatcag
gtcaccatcaacatcaacaacggcgcgcccttcgagggcaacaagctctaccgcatcgag
tacacctcatgcacgaccagcggcgtggtggatctcaaggggactcagtacaccaactcc
gtgacgatcggtgacaacacggtggcttcggatggcgtgggacaggactatgcgccgcag
accgagccctggaagggtggctacctcgacggcggtaagcgcaatatggaagccgtctgg
acgattgtggttccgggcaccgacattgccgccaacaaccacaagatcgacatcaccgac
accttcggcggcccccatgcggtctgtgcctcgggcgtgcaggtagtcatcgagaagtct
gactacctcccaggtcgggagaacgaacccaactaccgcactcctgccgcaggattcacc
attgctcccatcggcgcagtagccggcgcgagtaccttcaccgcggcgatcactgtggat
aacccggacacgttcaacgaagagcagtattactacgtcacgtaccggacctgcctgacc
accaccgaggtgccagactccgaggaccatctcaccaactcggcggtcgtcaacaagacg
tcgatcacgggaaagactgaggggcctgggttcacgagcggcaagaacggcgcgatcaac
accacgtcgcagactgtcggcggcgtggagcagccggcaggcaccaccctcaattggacc
gtggaaatctccggacacgatctcgagggccttacggaaccggcggtcatcaacgacagg
ttctcaccgaacatgacggtgtgtgaaatcggcggcgatctcaagagcaacctcaatctc
aaggtcgtcgcgcaagacttcttcgacggcaacaagaaacgcgatatcaccgatgccacc
tcggtggcgcgcgccgacggcggtttcgatctcactctcccgcgtgacgcggacggttac
agccgtcagacgaagtacctcgtcagctacaccctgtgcaccagcagcggcggactcgac
cagcgcgacacggaatacgccaacaccctcacctatgccggcaagcagacgctgtcgcag
agcgtcaagcaggaatggggcggtggcggcaccggtcaaggtgtgtcgcggggctcgttc
tcgctgctgaaggagatcgctcccttctccgagaaattcccgcaagacaccgagttcacc
gtgaaagtcgaggagttcgcccccgggcaaatcccagcgaccgacgccccggtgagctcc
tacgagatcaaggtgaaggctgacgggacaccggtcagtgggatcaacccccgcggaacc
ggctggcagatccgactgtccgagatcaacctccccaccgttgacggtgtgtatttcgag
agagggacgttccgcccgtcagagggtgtgacgctcaacggggaccgcaccgaggcgctg
gtgaccatcacaccgaagagcaatgtcggtgtcacactgctcaacaaagcgagtctggga
tcggcgcggatcaccaagtccgtcatcggtgacggagcgcgcacgggactcgaggctttc
gtcgtcaacgcagagatcgcctttggtgacgacgccgccggcaacgagttgcgtcaattc
actctgaaggacggtcagcactacgacctgggcaagttgcccatcggagcgaaagtcacc
ttcaccgaggtacaaccgatgaacaccgacctcgtgacctggtcggagccggtgatcaac
ccgaaaatgctcaccatcggcatcgatgcgtcggcgaacacggtctccgtcaccaacgag
gccaagatcacgcaaggcaccttcgaagtgagcaagaaactcacgggcccgaaggcgttc
gacaaggccgtaccggcgagcttcgacgtgattgccacctggctcgatacggacgacaaa
ccgcagagcaagacactctctcttccgtccgacggcaccgcggttccgttcggcgagaac
ctgcccggtggcaccgaagtcacactgacagagctggttccggcaaacggtgacggtctc
gcctatggcgtgcccgcatactccgggaatgtcaggatcaatccggacaacgcagccgtg
gtgaccatcggcaaggatctgcgcaagatcgaggtgtcgaacttcgtcgacgtcaacgac
ggcactctgcgcatcgcaaagcaggtcggcggtgaggccgccgaggccatcggcgacgac
gtggagttcacggtcgaggcgcgttggcgcgacggtgtggagtaccgcacccaggtgctg
agcgtcaagcagggacagaccacaccgctcggcgtcgacctccccgtcggcaccgaggtg
accttcaccgagaccggccgtcccgatgtcgacggagtcgagtggggcaccatctcctgg
ggaaccagcccggaaggcgaatcgtggctgcattcgaacctcgacggcaccgcgacgggc
atagtctccgacgacccgaccgacggtcgactgatcacgctgtcgaacgaggcgctgtgg
aaattcggatcggtcgaattcacgaagttcatcctcgacgctgacggcaaccccgtccgc
gcccccgaggccgacctgcctgacagcacgaagttcgaagtccgtatcgacggaatcgat
ccggcgctccccgccggaaccgatttcccggcagtgggccagaccatcaccctcgatgcc
ggaaacgactggagctggacgtccgacgaggttgtgccgcggaacaccgtgatcaccttc
tccgaggtcgaccccaagcccctggccggtatcgactgggcgcggccgtattactacgtg
tccgcggatgccggtgacgccgaataccgcgacaccgtcaaggcggtagccggtgagaag
gctgtggtggagatccacaaccgcccgatcccgaccaccgaggtggatatcgacaagatc
gtgaccggccccaagggcagccaggtggcaaaggacggatccacgatcttccaggtcacg
gctacgtggacggacatcgacaatgaggcgcggtcttgtgttctcgatgtcagaccgggc
gcttcggtcactccgaccgcccagtgcgacgcagccgtcatcgacggccgggtccagttc
ccgctgaacaccgacatcactttcacagaaaccggtgctcacactgacgtcaccaacgtc
aagtggggtgaagtgatctggggcgtcaaggaaggcaaggcggacgtctcgaatatcgac
ggccaaccgaccgcaacttccgtcaagctcaccggcgaagcaaacaagtcggtggtcctg
ggactcgagaacaaaaccagcagcaatgggctgatcatcatcccgatcccgatcccgctg
ccgccgtgggaaatcccgacgtggccgggctctgaggtacccggaggaccaggcaccgac
gtgtcgactcccggcaacaacactcccggcaataacggtggtggacacaacggtgctccg
ggcacgcctgctccgggaaatcctgctcaggccaaaccggaccagtcatcgtccctgccg
gtaaccggcgcgaacgtcatctggctcgccggtctggcgctggcgctgatcggcggtggc
gcatggctcaccctgcgtaaccgcaagcgtgcacccggccaggagtaa
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