Rhodococcus erythropolis PR4: RER_38620
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Entry
RER_38620 CDS
T00881
Name
(GenBank) conserved hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
rer
Rhodococcus erythropolis PR4
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rer03400
]
RER_38620
DNA repair and recombination proteins [BR:
rer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
RER_38620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
ResIII
TrwB_AAD_bind
AAA_22
AAA_30
FtsK_SpoIIIE
AAA
CbiA
SLFN-g3_helicase
AAA_19
Isochorismatase
T2SSE
AAA_7
Zeta_toxin
PhoQ_Sensor
AAA_6
Motif
Other DBs
NCBI-ProteinID:
BAH34570
UniProt:
C1A1T5
LinkDB
All DBs
Position
complement(4226157..4227638)
Genome browser
AA seq
493 aa
AA seq
DB search
MVIDGVADPTARVRIPLATINRHGLIAGATGTGKTKTLQGIAEQLSAAGVPVVMADVKGD
LSGLSKAGDPSEKMKARAVETGDDSWTPAGMPVEFLSLGTDGIGIPVRATITSFGPILLS
KVLGLNETQESTLGLIFHWADTQGLALLDLKDLRSVIAHLTSAEGKADLKGIGGVSSATA
GVILRALVNLEADGGDTFFGEPELETEDLLRVVGGAGVITLFELGAQAARPAMFSTFLMW
VLADLFQTLPEEGDLDKPKLVFIFDEAHLLFADASKAFLQQVEQTVKLIRSKGVGVFFCT
QLPTDIPNSVLSQLGARVQHALRAFTPDDQKALNKTVRTYPKTEHYDLEKALTSLGIGEA
IVTVLSEKGAPTPVAWTKIRPPRSLMDTIGNDAIKAAASSSPLNQKYGQTIDRESAYEKL
TAKVAGAPTADQSLDLPSLPDLPPPPPAEPEGPNIAEQILGNSAVKSFLRSAASTAGREI
SRNIFGTGSRRKR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
gtggtgatcgacggagtggcagatcccaccgcgcgggtgcggattccattggcgacgatc
aaccgtcacggtctgattgccggtgcgacgggtaccggcaagaccaagacgttgcagggc
atcgccgagcagctgtccgccgcgggtgtgccggtagtgatggccgacgtcaagggcgat
ctctcgggtctgtcgaaggcgggggatccgagcgagaagatgaaggctcgcgcagtcgag
acgggcgacgattcgtggactcccgctgggatgccagtcgagttcttgtcgttgggtacg
gacggaatcggtatcccggtgcgcgcgaccatcaccagtttcgggccgatcctgctcagc
aaagtgttgggcctcaacgagacccaggaatcgactctcggactgatcttccactgggcc
gacactcagggcctggccctgctggacctcaaggatctgcgttcggtcatcgcccacctg
acgagcgctgagggcaaagcggatctgaagggtatcggcggagtttcctccgcgacggcg
ggggtgattctgcgcgcgttggtcaacctcgaagccgacggcggtgacaccttcttcggc
gaaccggaactcgaaaccgaggacctgctgcgtgtcgtcggcggtgccggtgtgatcacg
ttgttcgaactcggtgcccaggccgcgcgtccggcaatgttctccaccttcctgatgtgg
gtgctcgcggacctgttccagacgctgcccgaagagggagatctggacaagccgaagctg
gtgttcatcttcgacgaggcgcaccttctgttcgcggacgcgtcgaaggccttcctgcag
caggtcgaacagacggtaaagctgattcgctccaagggcgtcggcgtgttcttctgcacg
caacttccgaccgacattcccaattcggtgctgtcgcagttgggcgcacgcgtccagcac
gccctacgcgcattcacgcccgacgatcagaaggcgctcaacaagaccgttcgtacctac
ccgaagaccgagcactacgacctggaaaaggcactgacttcactcggcatcggtgaagcc
atcgtgaccgtgctctcggaaaagggtgcgccgacgccggtggcctggaccaagattcgt
cctccgaggtcgctgatggacaccatcggcaacgacgcgatcaaggcggcagcgtcgtcg
agtccgctgaatcagaagtacggccagaccatcgaccgcgagtcggcgtacgaaaagttg
acggcgaaggtggccggtgctccgacggcggatcagtccctggatcttccgtcgctgccc
gatctgccgccaccgccgccggccgaacctgagggccccaacatcgccgagcagatcctg
ggtaactcggccgtgaagagtttcctgcgttcggcggcttcgactgcgggacgcgagatt
tcgcgaaatatcttcggtaccggtagccgtcgcaagcgctga
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