Rhodococcus erythropolis PR4: RER_40980
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Entry
RER_40980 CDS
T00881
Symbol
fadD
Name
(GenBank) probable long-chain fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer00061
Fatty acid biosynthesis
rer00071
Fatty acid degradation
rer01100
Metabolic pathways
rer01212
Fatty acid metabolism
rer02024
Quorum sensing
rer04146
Peroxisome
Module
rer_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RER_40980 (fadD)
00071 Fatty acid degradation
RER_40980 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RER_40980 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
RER_40980 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rer01004
]
RER_40980 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rer04147
]
RER_40980 (fadD)
Enzymes [BR:
rer01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RER_40980 (fadD)
Lipid biosynthesis proteins [BR:
rer01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RER_40980 (fadD)
Exosome [BR:
rer04147
]
Exosomal proteins
Exosomal proteins of breast milk
RER_40980 (fadD)
Exosomal proteins of breast cancer cells
RER_40980 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BAH34806
UniProt:
C1A2H1
LinkDB
All DBs
Position
4506928..4508715
Genome browser
AA seq
595 aa
AA seq
DB search
MREFSVPQSFSIPENVSMADSVFRHAEEDPTFVPFKRPSNGGWVDVTAAEFAKQVSAVAK
GLIASGVELGDRVAILSATRYEWVVLDYAIWTAGGCTVAIYETSSPDQAQWILEDSATTL
LVVETAKHAETHKEVTDGAEALREVLVIESGAIDELSSRGSAITDEELHTRRHQVTAASP
ATLIYTSGTTGRPKGVQLTHSNFYAESNACRLAMPESMVPGKKTLMFLPLAHVFARAISF
GAFDAKVTVAHTSDLTTLLEQFAGFKPNFILSVPRVFEKVYNSARQKAVDGGKGSIFDKA
AATAIEYSESLEKGGPGLALKLKHAVFDKLVYSKLRAALGGECERAVSGGAALGARLGHY
FRGVGIPIYEGYGLTETSAAITVNTSSAQRVGTVGKPINGHAARIAEDGELLLQGPVVFA
GYWHNDKATAESIVDGWFHTGDLGSIDNEGYVSITGRKKEIIVTAGGKNVAPAGLEDSLR
AHALISQCLVVGDGQPFIGALITLDPETLPGWVERNGLPAGTAIADLVKNADLIAEIDSA
VADANKKVSNPEQIKKYTILEVDFTQETGELTPTLKLKRNIIHEAHKTKISDLYA
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgagttctcagttccacagtcgttctcaattccggagaacgtatccatggccgac
tccgtgttccgtcacgccgaagaagaccccacattcgtgccgttcaagaggccgtcgaac
ggtggatgggtcgacgtcaccgcagctgaattcgcgaagcaggtctccgcagttgccaag
ggcctgatcgcttcgggcgtcgagctcggcgaccgcgtcgctatcctgtcagcaactcgc
tacgagtgggtcgttctcgactacgccatctggactgccggcggatgcaccgtcgcgatc
tacgagacctcctcccctgatcaggcgcagtggatcctcgaggattccgcgacaacactt
ctggtagtcgaaacggccaagcacgcggaaactcacaaggaagtcaccgacggtgcagaa
gccctccgcgaggttctggtcatcgagtcaggtgctatcgacgagctgtccagtcgcggc
tcggcaatcaccgacgaagaactgcacactcgtcgtcaccaggtcaccgctgcctcgccc
gcgaccctgatctacacctccggaaccaccggacgccccaagggtgtccagctgacgcac
tccaacttctacgccgagtccaacgcctgccgcctggcgatgccggagtcgatggtcccc
ggcaagaagacgctgatgttcctgccgctcgcccacgtattcgcgcgagctatctccttc
ggcgctttcgacgccaaggtcaccgtcgcccacacgtcggatctgacgacgctcctcgag
cagttcgccggtttcaagcccaacttcatcctctcggtaccgcgcgtgttcgagaaggtg
tacaactcggctcgccagaaggcagtcgacggcggtaagggcagcatcttcgacaaggct
gccgccactgccatcgaatacagcgagtccctcgaaaagggtggccccgggctggcactc
aagctcaagcatgcggtattcgacaagctcgtctactcgaagttgcgcgcagctctgggc
ggcgagtgcgagcgtgcagtctccggtggcgccgccctcggcgcgcgtctcggccactac
ttccgcggcgtcggcatcccgatctacgagggctacggactcaccgagaccagcgccgca
atcaccgtcaacacctcgagcgcgcagcgcgtcggcaccgtcggcaagccgatcaacggc
catgcagcacggatcgccgaggacggcgaactcctcctgcagggcccggtcgtcttcgcc
ggctactggcacaacgacaaggcgacggccgaatcgatcgtcgacggctggttccacacc
ggcgacctcggatcgatcgacaacgagggctacgtctccatcaccgggcgcaagaaggaa
atcatcgtcacggccggaggcaagaacgttgcaccggcaggcctcgaggattccctgcgt
gcgcacgctctgatcagccagtgcctcgtcgtcggcgacggtcagccgttcatcggtgca
ctgatcaccctcgatccggagactctgcccggttgggtcgagcgcaacggcctgcccgcc
ggcaccgcgatcgcggatctggtgaagaacgccgacctgatcgccgagatcgactcggcc
gttgccgacgcgaacaagaaggtctccaaccccgagcagatcaagaagtacacgatcctc
gaggtcgacttcacccaggagaccggtgaattgacgccgacgctcaagctcaagcgcaac
atcattcacgaagctcacaagaccaagatcagcgacctgtacgcctga
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