Rhodococcus erythropolis PR4: RER_44320
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Entry
RER_44320 CDS
T00881
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer03420
Nucleotide excision repair
rer03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RER_44320 (uvrD1)
03430 Mismatch repair
RER_44320 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rer03400
]
RER_44320 (uvrD1)
Enzymes [BR:
rer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RER_44320 (uvrD1)
DNA repair and recombination proteins [BR:
rer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RER_44320 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
RER_44320 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
BAH35140
UniProt:
C1A3F5
LinkDB
All DBs
Position
complement(4863008..4865500)
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AA seq
830 aa
AA seq
DB search
MNTYPALGEHDGHSQHDGGGARGHGAGSDALLEGLNPQQREAVVHAGSPLLIVAGAGSGK
TAVLTRRIAYLLAERGVTPGQILAITFTNKAAAEMRERVAALVGPRANAMWVSTFHSSCV
RILRAQAALLPGLNSNFSIYDSDDSRRLLTMISKDLELDTKRFSARLLATHISNLKNELV
GPEEAVVAADQDPAELPRLIAKVYGHYQQRLRAANALDFDDLIGETVALLQAFPQIAEYY
RRRFRHVLVDEYQDTNHAQYMLVRELVGGAGESDHAVAPAELCVVGDADQSIYAFRGATI
RNIEEFERDYPDARTILLEQNYRSTQNILSAANSVISKNTGRREKRLWTDSGEGELIVGY
VADNEHDEASFVASEIDRLVDQGETKFADIAVFYRTNNSSRALEEIFIRLGVPYKVVGGV
RFYERKEVRDIVAYLRVLANEDDTVSLRRILNTPRRGIGDRAEACVAVHSEHRNISFAAA
LRDGAEGKVALLNTRSQKAIASFLEMMDGLRALLPTPAADEDEPFELGDIGEVAEAVLER
TGYRAELAASSDPQDGARLDNLNELVSVAREFSSDARNAAGLIDPDDEETAAMREGEPDP
GSLAAFLERVSLVADADQLPDSDDGVVTMMTLHTAKGLEFPVVFVTGWEDGQFPHMRALG
DPAELSEERRLAYVGITRARQRLYLTRAIMRSAWGQPIQNPASRFIQEIPEDLINWRRED
PGTGGGFGSGRPGYGSGSRYGSQGGQGYGGGQNYGGGSGKAASTPSFGAARGRNNVLVLA
TGDRVSHDKYGLGTVLETKGTGPTATVTIDFGSAGKVRLMLIGGVPMVKL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgtacccagcactcggtgagcacgacggacattcccagcacgacgggggcggc
gcgcggggacatggcgcgggttcggacgccctcctcgagggtctcaacccgcaacagcgc
gaggccgtggtccatgccggttcgccgttgctgatcgtcgcgggcgccggctcgggcaag
acggcagtactgacgcgtcgcatcgcctatctgctggccgagcggggtgtcacccccggt
caaatcctggccatcacgttcaccaacaaggctgcggccgagatgcgcgagcgtgtggca
gcccttgtcggaccgcgtgccaacgccatgtgggtatcgacgttccactccagttgcgtg
cgcatcctgcgagcacaggcggcgctcctgcccggtttgaactcgaatttctcgatctac
gattccgacgattcgcgtcgactgctgacgatgatctcgaaggacctcgagctcgacacc
aaacgattctccgcgcggcttctcgccactcacatctccaacctgaagaacgaactcgtc
ggaccggaagaggcggttgtcgcagccgatcaggatccggccgaactgccgcgactgatc
gccaaggtctacggccattaccaacagcggttgcgtgcggcgaacgcactcgacttcgac
gatctcatcggtgagaccgttgcgcttctccaggcgtttccccagatcgccgagtactac
cgccgccgcttccgtcacgtgctcgtcgacgagtaccaggacaccaaccacgcgcagtac
atgctggtgcgtgaactggtcggcggtgccggagagtccgaccatgccgttgccccggcc
gaattgtgcgtcgtcggtgacgccgatcagtcgatctacgcattccgcggagccactatc
cgcaacatcgaagagttcgaacgcgactacccggacgctcggaccatccttctcgaacag
aactaccgttcgacgcagaacattctgtctgcggccaactccgtgatttccaagaacacc
ggccgacgtgaaaagcgtctgtggaccgattcgggtgaaggtgaactgatcgtcggctac
gttgcagacaacgagcacgacgaagcatcttttgtcgcctcggagatcgatcggctggtg
gaccagggcgagaccaaattcgccgacatcgcggtgttctaccggaccaacaactcctca
cgcgcgctcgaggagatcttcattcgactcggagtgccgtacaaggtggtcggcggcgtt
cgcttctacgagcgcaaggaagttcgggacatcgtcgcgtatctgcgcgtcctcgccaac
gaagacgacaccgtgagcctgcgacgcattctcaacacgccacgacgcggtatcggtgat
cgagccgaagcctgcgtcgctgtgcactccgagcatcgcaacatcagcttcgccgccgca
ctgcgcgacggcgcggaaggcaaagtggcgctgctcaatacgcggtcacagaaggccatc
gcgtcgttcctcgagatgatggacgggctgcgggccctgctgccgacaccggccgccgac
gaggacgaacccttcgaactcggtgacatcggtgaggtcgccgaggcagtgctcgagcga
accggctaccgcgccgagcttgcggccagcagcgatccacaggacggcgcgcgactcgac
aacttgaatgaacttgtcagcgtggcaagagaattcagctccgacgcacgaaacgcggcc
ggactgatcgatccggacgacgaggaaaccgcagcaatgcgtgaaggcgaacccgatccg
ggttcgctcgccgccttcctcgaacgggtatcacttgtcgccgacgccgatcaactgccg
gactccgacgacggcgtcgtcacgatgatgacgcttcacaccgccaagggcctcgagttc
ccggtcgtcttcgtcaccggttgggaggacgggcagttcccgcacatgcgcgccctcggt
gatccggcagagctgtccgaagagcgtcgactcgcttacgtcggcatcacccgcgccagg
cagcgcctgtacctgacgcgcgcgatcatgcgttcggcttggggacaaccgatccagaac
ccggcgtcgcggttcatccaggagatcccggaggacctgatcaattggcgccgtgaggat
ccgggcaccggtggtggattcggaagcggcaggccgggttacggcagcggaagccgatac
ggcagccagggcggccagggatacggtggcgggcagaactacgggggagggtccggcaag
gctgcgtcgactcccagtttcggtgccgcgcgtggccgcaacaacgttctggtccttgcc
acgggtgaccgcgtcagtcacgacaagtacggtctgggcaccgtgttggaaaccaagggc
accggacccaccgcgacggtcaccatcgacttcggtagcgcgggcaaggtgcggttgatg
ctcatcggcggtgtgccgatggtcaagctgtag
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