Rhodococcus erythropolis PR4: RER_45790
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Entry
RER_45790 CDS
T00881
Symbol
phr
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rer
Rhodococcus erythropolis PR4
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rer03400
]
RER_45790 (phr)
Enzymes [BR:
rer01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RER_45790 (phr)
DNA repair and recombination proteins [BR:
rer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RER_45790 (phr)
Prokaryotic type
RER_45790 (phr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAH35287
UniProt:
C0ZMM9
LinkDB
All DBs
Position
complement(5017241..5018575)
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AA seq
444 aa
AA seq
DB search
MVWFRRDLRVGDLPILSAASDAGGRTLGLFVLDENLLGPAGSPRQDQLFANLTALDHQLD
GKLMVVRGDPADVVPRVAESVGAEEVHISADYGPYGRRRDAAVAEQVELIATGSPYAVAP
GRVTKADGDPYKVFTPYFRQWMEHGWRGPASTDAQTVRWFDPSDKEGGPRRVSIPAPSAS
VSDFVGEVGALEQWKEYCENDLDRYDDERNRPDLDTTSRMSIPLKYGTIHPRTMLADLSK
RLGDGAQAYRRQLAWRDFYADILFQRPDSARKNYDDKFDRLRHDGGVDADAAFTAWCEGK
TGFPIVDAGMRQLAAENWMHNRVRMIVASFLVKDLHIPWWRGARFFMSHLVDGDLASNQH
GWQWTAGSGTDASPFFRVFNPITQGEKFDPDGTYVRRWVPELRDVPGKAVHSLKAMRPVD
YPDPIVDHAHEREEALRRYGEIKG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtggtctggtttcgacgtgatctgagggtaggtgaccttcccatcctgagtgcagcgtcg
gatgccggcgggcggacgttgggtttgttcgttctcgacgagaacctgctcggaccggca
ggctcaccccgtcaggatcaactgttcgccaacttgacggcgctcgatcatcaactcgac
ggaaaactgatggttgttcgaggtgatccggcggacgtggtgccccgtgtagcggaatcc
gttggcgccgaagaagttcacatcagtgccgactacggaccctacggccgacggcgcgac
gcggccgtggcggagcaggtggagttgatcgccaccggatctccgtatgccgtggcgccc
ggacgcgtcaccaaggcggacggtgatccgtacaaggtgttcacgccgtacttccgtcag
tggatggaacacggttggcggggccccgcgtcgaccgatgcgcagacggtccgttggttc
gatccgagcgacaaggagggtggcccgcggcgggtgagtatccccgcgccatccgcctcc
gtcagcgatttcgtcggtgaggtcggcgccctcgaacagtggaaagaatactgtgagaac
gatcttgaccggtacgacgacgaacgaaatcggcctgacctcgacaccacgagccggatg
tcgattccgctcaagtacggcacgatccatccgcgaacgatgttggcagatctctccaag
cgactgggcgacggcgctcaggcttaccgtcgccagttggcgtggcgagacttctacgca
gacatcctgtttcaacgccccgacagcgcgcggaaaaactacgacgacaagttcgaccgt
ttacgtcacgacggtggagtggacgcagacgccgccttcacggcctggtgtgagggcaag
accggcttcccgatcgtggatgccggcatgcggcaactcgcggccgagaactggatgcat
aatcgggtgcgaatgatcgtcgcgtcttttctagtgaaggacctacacattccgtggtgg
cgtggcgcacggttcttcatgtcgcatctggtggacggtgacttggcctccaatcagcac
gggtggcagtggactgcagggtcgggcacagatgcttcgcccttcttccgcgtcttcaac
cccatcacgcagggagagaagttcgatcccgacggcacatacgtccgtcggtgggttccc
gaactccgcgatgttcccgggaaggccgtccactcgttgaaggcgatgcgcccggtcgac
tacccggacccgatcgtcgatcacgcgcatgagcgtgaggaagccttgcgccggtacggc
gagatcaagggctga
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