Rhodococcus erythropolis PR4: RER_49230
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Entry
RER_49230 CDS
T00881
Name
(GenBank) putative fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer00061
Fatty acid biosynthesis
rer00071
Fatty acid degradation
rer01100
Metabolic pathways
rer01212
Fatty acid metabolism
rer02024
Quorum sensing
rer04146
Peroxisome
Module
rer_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RER_49230
00071 Fatty acid degradation
RER_49230
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RER_49230
09145 Cellular community - prokaryotes
02024 Quorum sensing
RER_49230
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rer01004
]
RER_49230
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rer04147
]
RER_49230
Enzymes [BR:
rer01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RER_49230
Lipid biosynthesis proteins [BR:
rer01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RER_49230
Exosome [BR:
rer04147
]
Exosomal proteins
Exosomal proteins of breast milk
RER_49230
Exosomal proteins of breast cancer cells
RER_49230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
KcnmB2_inactiv
Motif
Other DBs
NCBI-ProteinID:
BAH35631
UniProt:
C0ZPD5
LinkDB
All DBs
Position
5373091..5374791
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AA seq
566 aa
AA seq
DB search
MTATEIQSPDMSSSWPLGLPRSLEYPECGADAILAGAARSYPERLALVDGDTSLTYSQLH
DQALRVAQGLRERGVQPGDAVGLHMPNSIWFIVAYYGALCAGAAVAPINPAQPVTELKRQ
LDDVDAKVVFTHPSCAATAIEANTLSAPPRILVLVPGVGAQSGHCEGLTSITDLASSKPL
ADYRVDPNLVAHLQLTGGTTGKSKAVRVLHRNLVANVLQSACWRSGHRTELVDGALLVRP
IEGAVTRYSIVPGEGASISIAPLFHGLGLVSHNFTTLLGGTVILGTRFDPDRFLADVDKY
QVTYIGGSPTMYYALLRARTLREHGLGSVRILGSGAAPLDTTAIRTLREVFPNALVTEGY
GLSEATMGLTMGSPCDERPTPLGSVGLPFPDTEIEIRDEVTEAVLATGETGQIWARGPQI
TDGYHNEPELSAGQFIGGWLHTGDMGWRDEHGNLFIGGRSKDLIIYKGYNVYPQPLEELV
CTHPDVLQAAVVGAPDQLAGEIPVAFVVVNPESVDRIEQIATEIMDHVATQVAPYQKIRE
VYVLDELPSTQTGKIRKNELRDTLAP
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgacggctacagaaattcagagccctgacatgagttcgagttggccgctcggactgcca
cgcagcttggaatatcccgaatgcggtgccgacgcgattctggccggagcggcccgctcg
taccccgaacgtctcgccctcgtcgacggcgacacgtcactgacctactcgcaattgcat
gatcaagcgctgcgcgtagcgcagggtctgcgggagcgtggtgtccagccgggtgacgca
gtgggactgcacatgccgaactcgatctggttcattgtcgcgtactacggcgcactgtgc
gccggagcagcagtggctccgataaatccggcgcagcctgtgaccgaattgaagcgccag
ctcgacgacgtcgacgccaaggtcgtattcacccatccatcctgtgctgcaacggcaatc
gaggccaacacactgtccgcaccgcctcgcatcctggtactggttccgggagtcggcgcg
cagtcaggccattgcgaaggtctcacctccatcacggacctcgcctcgtcgaaaccattg
gccgactaccgggtggatcccaaccttgttgctcacctgcaattgaccggcggcacaacc
ggaaagtccaaggccgtacgggtacttcaccggaatctcgtggccaacgtgctccaatcc
gcctgttggcgctccgggcatcgaaccgaactcgtcgacggtgcacttctcgttcggccg
atcgagggcgcagtcacgcgttactccatcgttccgggtgaaggcgcgtcgatttcgatc
gcgcctctgttccacggcctcggtctggtcagtcacaacttcaccaccttgctcggtggc
acggtgatactagggacgcgcttcgatccggaccgatttctcgccgacgtcgacaagtat
caggtgacgtacatcggcggatctcccacgatgtactacgcgttgctacgcgcacggact
ctgcgggagcacggtctgggttcggttcggattctcggatccggagcagccccactcgac
acgacggcgatccgtacactgcgagaggtcttcccgaacgcgctcgtcaccgaaggctac
gggctcagcgaagcaacaatgggtctgaccatgggttcaccgtgcgacgaacgccccact
ccgttgggaagcgtcgggctccccttccccgacaccgagatcgagatccgcgacgaagtc
accgaagccgtcctggctacgggtgagaccgggcagatctgggcccgcgggccacagatc
accgacggataccacaacgaacccgaactcagcgccggtcagttcatcggcggttggctt
cataccggagacatgggttggcgtgacgagcatggcaatctgttcatcggcggccgctcc
aaggacttgatcatctacaaggggtacaacgtctacccgcaaccgctcgaagagttggtg
tgcacgcaccccgacgtactgcaggcggccgtggtcggcgcgcccgaccaactggccggg
gagattccggtggccttcgtcgtggtcaacccggagtcggtcgatcgcatcgagcagatt
gcgaccgagatcatggatcacgttgccacgcaggttgctccgtaccaaaagatacgcgag
gtatacgtactcgacgagctaccgtcgacgcagaccgggaagatccgtaagaacgaactt
cgcgacactctggcgccctga
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