Rhodococcus erythropolis PR4: RER_55310
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Entry
RER_55310 CDS
T00881
Name
(GenBank) putative succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer00020
Citrate cycle (TCA cycle)
rer00190
Oxidative phosphorylation
rer00650
Butanoate metabolism
rer00720
Other carbon fixation pathways
rer01100
Metabolic pathways
rer01110
Biosynthesis of secondary metabolites
rer01120
Microbial metabolism in diverse environments
rer01200
Carbon metabolism
Module
rer_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rer_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rer_M00149
Succinate dehydrogenase, prokaryotes
rer_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RER_55310
00650 Butanoate metabolism
RER_55310
09102 Energy metabolism
00190 Oxidative phosphorylation
RER_55310
00720 Other carbon fixation pathways
RER_55310
Enzymes [BR:
rer01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RER_55310
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
NAD_binding_8
GIDA
Pyr_redox
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
BAH36239
UniProt:
C0ZSP7
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All DBs
Position
5978144..5980096
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AA seq
650 aa
AA seq
DB search
MNSFELDDLRSIGTPVDGKVPAGDPETAWPTRKLDYKLVSPLNRRKFTVIVVGTGLAGAA
CAASLGELGYHVESFTFHDAPRRAHSVAAQGGINAARARKVDNDSLARFVKDTVKGGDFR
GREADCFRLAEESVRVIDHMNAIGAPFAREYGGTLATRSFGGVQVSRTYYTRGQTGQQLQ
IASSQALQRQIAAGTVNLHTRTEMLDLIVSDGRAQGIVTRDLVTGEIGATTGHAVVLASG
GYGTVFHKSTLAKNSNATAAWRAHRRGALIASPSFIQFHPTALPVNSEWQSKTILMSESL
RNDGRIWVPAKPGDDREPGDIPENERDYYLERKYPAFGNLSPRDVSSRAAREQIDSGHGV
GPLKNSVYLDFRDALARLGRKTIEERYGNLFSMYRDATSEDPYTVPMRIAPGAHFTMGGL
WNDYDQMTSIPGLFVGGEAGWGYHGANRLGANSLLSACVDGWFTLPYAIPNYLAPLLGSA
PLELSDPAVTSTLSDVSGRVDLLLSVGGTHGPDRFHRQLGEILYAGCGVTRTAEGLTKAI
SEIRALRGDFWSNLRVAGSGNQFNQELERAGRVADFLELAELMCVDALDRDESCGAHFRA
EHQTPDGEAQRNDKDWCFVSAWETAKDGRHIRHDEPLSFTAVPLQTRNYV
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagcttcgaactcgacgatctgcgcagcatcgggacgccggtggacggtaaggtc
ccagccggcgatccggagacagcctggcccactcgcaaactcgactacaagctcgtcagc
ccgctcaaccggcgcaagttcacggtcatcgtcgtcggtaccggactcgccggcgcggcc
tgcgccgcctcacttggtgaactgggctaccacgtcgaatccttcaccttccacgatgca
ccgcgccgtgcacacagcgtcgccgcgcagggcggcatcaacgccgctcgtgcccgaaag
gtggacaacgacagtctcgcccgcttcgtgaaggacaccgtcaagggcggcgatttccgc
ggccgcgaggccgactgcttccgactcgcagaggaatccgtacgcgtcatcgatcacatg
aatgccatcggagcaccgttcgcccgtgagtacggcggcactctcgctacccgatccttc
ggcggcgtacaggtgtcgcgcacgtactacacgcgcgggcagacaggccagcagttgcag
atagcgtcgtcgcaggcactgcaacgtcagatcgcagccggaacggtcaacctccacacc
cgaaccgagatgctcgatctcatcgtttcggacggccgagcgcaagggatcgtcacacgc
gatctcgtgaccggtgagatcggcgccaccacaggccatgccgtcgtactggcctccggt
gggtacggcaccgtgttccacaagtccacacttgcgaagaactccaacgccaccgccgca
tggcgagcgcaccgacgcggcgcgctgattgcctcaccctcgttcatccaattccatccg
acggcacttcccgtcaactccgagtggcagtcgaaaaccattctgatgagcgaatcacta
cgcaacgacggccggatctgggtaccggccaagcccggggacgatcgcgaaccaggcgac
attcccgaaaatgagcgcgactactacctcgagcgcaaatatccggcgttcgggaacctc
tctccccgcgacgtctcttcacgggccgcccgcgagcagatcgactccggtcacggcgtc
ggtcctctgaaaaacagtgtgtacctggatttccgcgacgcattggcacggctcggccgc
aagaccatcgaggagcggtacggaaatctgttctcgatgtatcgcgatgccaccagcgaa
gacccctatacggtgccgatgcgcatcgcccccggagcccacttcaccatgggaggactg
tggaacgactacgaccagatgacttccatccccggcttgttcgtcggcggtgaggcaggg
tggggatatcacggggccaaccgcctcggcgccaattcgttgctctcggcatgcgttgac
ggctggttcaccctcccgtacgcgattccgaattatcttgcgccgctactcggatcagca
cctcttgagctttccgatcccgcagtgacgtcgacgctcagtgacgtgagcggtcgggtg
gacctgctgctctcggtcggcggaacacatggccccgacaggtttcatcgacaactgggc
gagatcctctatgcgggttgcggtgtcacccgaacggccgaaggcttgaccaaggccatc
tccgaaatccgagcattacgaggcgatttctggtcgaacctacgagtcgccggcagcgga
aaccagttcaaccaggagctggaaagggccggcagggtagccgatttcctcgaactcgcc
gaactgatgtgcgtcgatgctctcgatcgtgacgagtcctgtggagcgcactttcgggcc
gaacatcaaactcccgacggcgaagcacagcgaaacgataaggactggtgcttcgtctcc
gcgtgggaaaccgccaaggacggcagacacattcgacacgacgagccgttgtccttcacc
gctgttccactgcagacgaggaactacgtatga
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