Rhodococcus erythropolis PR4: RER_pREL1-00240
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Entry
RER_pREL1-00240 CDS
T00881
Name
(GenBank) hypothetical protein
KO
K21473
peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
Organism
rer
Rhodococcus erythropolis PR4
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rer01002
]
RER_pREL1-00240
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rer01011
]
RER_pREL1-00240
Peptidases and inhibitors [BR:
rer01002
]
Cysteine peptidases
Family C40
RER_pREL1-00240
Peptidoglycan biosynthesis and degradation proteins [BR:
rer01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
RER_pREL1-00240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M23
NLPC_P60
CHAP
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
BAE45967
UniProt:
Q3L9Z6
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All DBs
Position
pREL1:30999..32714
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AA seq
571 aa
AA seq
DB search
MTLLAAPPSPDSESSSKKWWWILISVPIVCMVVLMAPILVILSLTGEDTTCGQPTGTDIR
ADGSLVGLKPGSLAVPMAEGTYTISSPFGMREGEMHDGQDYAAPLDTPFYAAGDGEVVVA
GPASGYGHWIRIRHTIDGQTVESLYGHMTAAGVLVKAGDKVTAGQLIGKVGSEGQSSGPH
LHFGIYPGQWSMGGGVDPVPWLKQRGTASPAAASAPTQPDAELVAKSTPAGTGGLNASQT
ALAKQAVAIGESMGVPDQGIVVALATMSQESTYRMLASSNVPESLQYPHDGVGSDHLSVN
QYQQQVGIWGTAEDLMNPVTANVKFFDALLKVSGWQSMPVTVAAQTVQGSAHPEAYADDE
TLARQLASQFKGSGKDLTPQELADIVKGGAATTIIDGGACAPGTSNPGGPQFKPGGPFGA
NVIAAASQWIGTTYAWGGGDQNGPTKGISDGGGAGDANGDSNKVGFDCSGLTLYAVYQAS
GGQILLPHFTGSHSNPGQLYDSRGQDIPFDQKRPGDLIYFGAGGDTHHVGIFYGTENGQD
MLLNAPESGKSVSIMPLSGWAGEEMYVKRFG
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcctcgccgcaccaccgtcccccgattcggaaagttcgtcgaagaagtggtgg
tggatcctcatctccgtgccgatcgtgtgcatggtcgtgctgatggcgccgattctcgtc
atcttgtccctcaccggtgaggacaccacctgcggtcagccgaccggtaccgacattcgt
gcagacggatcgttggtaggtctgaaacccggatctctggcagttccgatggccgaaggt
acgtacacgatcagctcgccgttcggcatgcgagaaggcgaaatgcatgacggacaagat
tacgcggccccgctggatacccccttctacgctgcaggagacggtgaagtcgtcgtcgct
ggaccggcctcgggctacggacactggatccgcatccggcacaccatcgacgggcagacc
gtcgaatctctctacgggcacatgaccgcagcaggagtgctcgtcaaagccggcgacaag
gtcaccgcaggccaactcatcggcaaagtcggcagcgaaggacaatccagcggtccgcac
ctgcactttggtatctacccaggacaatggtcgatgggcggtggagtcgacccggttccc
tggctcaagcaacgaggaaccgcctcccctgcagcagcctccgccccaactcagcccgat
gcagagttggtggcgaaatccacccccgccggcacgggcggtctcaacgcaagccaaacg
gcgctggcgaaacaagctgtcgccataggcgagtccatgggcgttcctgatcaaggaatc
gtagttgccttggccaccatgagccaggaatcgacctaccgaatgctcgccagctccaac
gtgcccgagtcgctgcaatatccccacgacggcgtcggaagcgaccacctctcggtcaat
caataccaacaacaagtcggcatctggggcaccgcggaagacctgatgaaccccgtaacg
gcgaacgtcaaattctttgacgcgttgctcaaagtttcgggctggcaatccatgccagtc
accgtcgccgcccaaaccgtgcagggatcggctcacccggaggcatacgccgacgacgaa
acgctcgctcggcaactagcttcgcagttcaaaggttcaggtaaagacctgacgccgcag
gagctggcagacatcgtcaagggtggcgccgcaacaacgatcatcgacggcggcgcctgc
gcgcctgggacctcgaaccccggtggacctcagttcaagccgggtgggccgttcggagcg
aacgtgatcgctgcggcctcccaatggatcggaacaacgtacgcgtggggaggcggagat
cagaacggtccaacgaaaggcatcagtgatggtggcggggcaggagatgcgaacggcgat
tcgaacaaggtcggcttcgactgctcaggcttgacgttgtacgcggtttaccaagcctcc
ggtggccaaattttgctccctcacttcaccggaagtcattccaaccccggccagctgtac
gactcccgcggccaagacattccgttcgaccagaagcgcccaggtgacctgatctacttc
ggcgcaggcggcgacacccatcacgtcggcattttctacggcaccgaaaacggtcaggac
atgttgctcaacgccccggaatcggggaaaagcgtctcgatcatgccgctctccggctgg
gccggcgaagagatgtacgtcaaacgattcggatag
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