Rhopilema esculentum: 135681202 Help Entry 135681202         CDS       T09994                                  Name (RefSeq) 5'-3' exoribonuclease 2-like   KO K12619   5'-3' exoribonuclease 2 [EC:3.1.13.-] Organism res  Rhopilema esculentum Pathway res03008   Ribosome biogenesis in eukaryotes res03018   RNA degradation Brite KEGG Orthology (KO) [BR:res00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     135681202   09123 Folding, sorting and degradation    03018 RNA degradation     135681202  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:res03021]     135681202    03019 Messenger RNA biogenesis [BR:res03019]     135681202    03009 Ribosome biogenesis [BR:res03009]     135681202    03016 Transfer RNA biogenesis [BR:res03016]     135681202 Transcription machinery [BR:res03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      135681202 Messenger RNA biogenesis [BR:res03019]  Eukaryotic type   mRNA degradation factors    5'-3' decay     5' exonucleases      135681202 Ribosome biogenesis [BR:res03009]  Eukaryotic type   Pre-60S particles    RNases     135681202 Transfer RNA biogenesis [BR:res03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     135681202 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XRN_M XRN_N DUF5669 Motif Other DBs NCBI-GeneID:  135681202 NCBI-ProteinID:  XP_065051602 LinkDB All DBs Position Unknown AA seq 978 aa AA seqDB search MGVPAFFRWLSRKYPSIVVHAVEQKPVDVDGNKVYVDTTKANPNDVEFDNLYLDMNGIIH PCCHPENKPAPKNEDEMMVAIFEYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR AAKDSRESKDEMARIREDLRQNGALLPPEKEKGEHFDSNCITPGTQFMDRLSKCLQYYIS DRLNNDPGWKGIKVILSDANSPGEGEHKIMDYIRKQRGQPDHDPNTKHCLNGADADLIML GLATHEPNFTIIREEFKPGKPRPCTLCGQIGHDLAECKGLPKEKAGEFDELTKPVGEEVE FIFIRLNVLREYLERDLRMDGLAFKYDFERSLDDWVFMCFFVGNDFLPHLPSLEIREGAI DRLIRIYKGVMARAGGYLTENGYVSLERVQQILQELGQAEDQIFKTRQEKELNFRRRKKD QDRANKRAKMGHDLSDLTPLMNKSPNWSPRDSPRQFGQPHRSSPGYSTNQRAASDLRSML RTPETNERSAAPSPVSTTPISRMNRKRPNEQEEANEEEDEEPADDVRLWEDGWRERYYLQ KFGVSTELSGYKTYEEFRKEVGWAYVRGLCWVLQYYYQGCPSWKWYFPYHYAPFASDFVD IVDANVTFEKGTGPFKPLEQLMSVFPAASGNFLPPTWRELMSGPESPIIDFYPEDFKIDL NGKKYAWQGVALLPFVDEKRLLSTLKSVYGDLTEEEVRRNRRDINLLFCGSKNSLFDYLV GLYEGGMLKEKQEIVTKFSQGMKGTVMSNPDVVMPKGSLESPVPGLQGLKNQMAISVKFE DPKYDEDFVYPATLLPNAVIPGKVLKPEDFPSNRRYTPQTGFSPRSHNPYHISPGGRRMI GYNQDSPQRFNSPDQSRSPRMARPQSQGYRSPYGNYNSPDRTPSPLARQPSPFYRPGGNM PQRQPSPYNRQDGAGSSPRFQGRRSFGGGGYQGSDNRGYADNRGGWNQQSFDNQRDDRSR QDPRRHSFPMNQNRFRPY NT seq 2937 nt NT seq  +upstreamnt  +downstreamnt atgggagttccagcatttttcaggtggctttccagaaagtatccatcgattgtggtccat gctgttgagcaaaagccagttgatgttgatggtaataaagtttatgttgatacaactaaa gcaaatcctaatgatgtggagtttgacaatctctatcttgacatgaatggaatcatccat ccttgctgtcacccggaaaataagcctgcacctaagaatgaagatgaaatgatggtggca atttttgagtacattgataggttatttgcaattgtgaggccaagaaaactattgtacatg gcaattgatggagtggcaccgagggccaagatgaatcagcaaagatcacgaagatttaga gctgccaaagattcaagagaaagcaaagacgaaatggcacgtataagagaggatttgcga caaaatggtgcattgctaccacccgagaaagaaaagggagaacactttgacagcaactgc atcacaccgggcacgcagtttatggatcgcctttctaagtgtttgcagtactatatcagt gatcggctgaataatgatcctggttggaaaggaataaaggttatattatccgacgccaat tcgccaggggaaggtgaacacaagataatggattatataagaaagcagagaggacaacct gatcatgacccaaacacgaagcattgcttgaatggtgcagatgctgatttgattatgctt ggcttggctacacacgagccaaattttacgatcattagagaagagtttaaacctgggaaa ccacgaccctgtactttatgtggccagataggccatgacttagccgagtgcaaagggctg ccaaaagaaaaggctggagagtttgatgaactgacaaaaccagttggtgaagaagtcgaa tttatattcatcaggctaaatgttttgcgagagtatctagaaagagatttgagaatggat gggctggctttcaaatacgattttgagcgttctttagacgattgggttttcatgtgtttc tttgtgggcaacgatttcttgccgcatttgccgtctttagagatcagggaaggagcaatt gaccgtcttattagaatctacaaaggtgttatggccagagctgggggatacttgacggaa aatgggtacgtaagtctggaaagagtgcagcaaattcttcaagaactcggacaagcagaa gaccaaatattcaagactaggcaagagaaagagcttaatttcagaagacgaaagaaggat caagatagggcaaataaaagagcaaaaatgggccatgatttgtccgaccttactccactg atgaacaaatctcccaactggagcccaagggacagtcctcggcaatttggtcaaccacat cgatccagcccgggttattccacaaaccagagagctgctagtgacttgcgttctatgttg agaacaccagaaacaaacgagcgttctgcagcaccctctccagtctctactacgccaata tcgcggatgaaccgtaaaaggccaaatgagcaagaggaagccaatgaggaagaagatgag gagcctgctgatgacgtcaggttatgggaagacggatggagagagcgatattatttgcag aaatttggagtttctactgaactaagtggatacaaaacgtacgaagaatttcgcaaagaa gtgggttgggcatacgttcgtggtctgtgctgggtgctccagtattactatcagggttgc ccgtcatggaaatggtattttccatatcactatgcaccttttgcttcagactttgtagac atcgttgatgccaacgtgaccttcgagaaaggaactggacctttcaaaccgttagaacaa ctaatgagtgtgttcccagctgcaagtggcaatttcctgccaccaacctggcgagaattg atgtccggtccggaatcgccaattattgacttctacccagaagacttcaagattgatctt aatgggaaaaaatatgcttggcaaggtgtcgcgttgttgccatttgtggatgaaaagaga ctgctatcaacattaaaatcagtgtatggtgacctcactgaggaagaagttcgcaggaac agaagggacatcaacctacttttctgtggcagcaagaactcgctttttgattatcttgtt ggcctttacgaaggtggcatgttaaaagagaaacaagaaattgtcacgaaattttctcag ggcatgaaaggaacagtgatgtcaaacccagatgtagtgatgcctaaaggttcgctagaa agtccagtacccggtcttcaagggttgaagaatcaaatggctattagtgtcaagtttgaa gacccaaaatacgacgaagattttgtgtatccagcaacacttttaccaaatgcagtaata cctggtaaagttttgaagcctgaagattttccttcaaaccgacgatacactccccaaact ggattcagcccgcgctcccacaatccgtatcacatatcacccggaggcaggcgtatgatt ggatacaatcaagacagtcctcaaaggtttaattcgcctgaccagtcacgaagcccaaga atggccaggccgcagtcacaaggctacagatctccatatggaaattataactctccagat cgcactccaagcccgttagccagacagccgtcgccattttaccgtccaggaggtaacatg ccacaacggcaaccaagcccttacaaccggcaagatggggctggatcgagccctcgtttt caaggccgacgttcatttggaggtggcggttatcaagggtcggataatcgtggttatgca gacaataggggtggatggaatcagcagtcatttgataaccaaagagacgacaggtcaaga caggatcccagaaggcattcgttcccgatgaaccaaaatcggttcaggccgtattaa

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