KEGG   Rhopilema esculentum: 135681511
Entry
135681511         CDS       T09994                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
res  Rhopilema esculentum
Pathway
res03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:res00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    135681511
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:res03021]
    135681511
   03036 Chromosome and associated proteins [BR:res03036]
    135681511
Transcription machinery [BR:res03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     135681511
   Coactivators
    SAGA/TFTC/STAGA complex
     135681511
Chromosome and associated proteins [BR:res03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     135681511
    STAGA complex
     135681511
    TFTC complex
     135681511
    SAGA complex
     135681511
    SLIK complex
     135681511
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 TFIID_NTD2 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N WD40_RFWD3 WD_LRWD1 WD40_like Beta-prop_HPS5 Beta-prop_WDR19_1st PEP5_VPS11_N Beta-prop_WDR11_2nd LisH_PAC1 zf-RING_6
Other DBs
NCBI-GeneID: 135681511
NCBI-ProteinID: XP_065052100
LinkDB
Position
Unknown
AA seq 653 aa
MAEAKKDEKQLLKAVLQFLKKTNLKATEDALKSEAGIDEEEYSSVRSLSAVENVPDINSL
LAEYENEGDPLNYAEYYKGLQDFIGRTLDIHRPEMSLVLYPLFVHLYLELVYKELEVEAN
AFFAKFEPYQEGYRQEDLRKLKCITKRDHMFCSNEILDLFRSSKYVIRISRETFGMLKKY
LQENQRDVILNIIQQHFHLDVFDGRPRKKRNLGAGTGGISGEAPQYANNAKVFYGLIHDP
ELNASLEEDSDEEEDKEKPKKKKSKRDEAKKRQATDPHAPKPERISFPSLKDSDKRLKLA
KYKELLKRLHVGPNSLPSICFYTVLNASQGLNVIEFSDDSKMLAAGFDDSSIKLWSLTPR
KLRTLKAPYELARIDKEADDVLERIMNERSATEQKTLLGHSGPVYGLSFNENNSFLVSSS
EDGTVRLWSLHTFTNLVVYKGHTFPVWSVKFCPKGFYFASVSADRTARLWSTDSHTPLRI
FAGHLADLNAIDFHPNCNYIATGSSDRTVRVWDILTGNSVRLFTGHKGAVHAVAFSPDGK
HLVSSGVDKRILLWNIADGVPVIDLTGHTEAVFALSFSRDGHVLASGGVDNCLKFWDIKR
ACKMEDDEEMDQFENNESAFEMASFLTKSTPVHSIHFTRKNLVLASGPFVSSH
NT seq 1962 nt   +upstreamnt  +downstreamnt
atggccgaggcaaagaaggacgaaaaacagctgcttaaagcagtattgcagtttctaaag
aaaacgaacttgaaggcaacagaagatgccttgaaatcagaagctggtatagatgaagag
gaatatagttctgtacgctccctttcagcagtggaaaatgtgccagacataaatagcctt
ttagcagagtatgaaaatgagggtgatcctctcaactacgctgaatattacaaaggctta
caagactttattggaagaactttggacattcataggcctgaaatgtcattggtcttatat
cccctgtttgtacatttgtaccttgaattggtttacaaagagttagaagttgaagctaat
gctttctttgctaaatttgagccatatcaagaaggatatcgtcaagaggatttgagaaaa
ctaaaatgcatcacaaaaagagaccacatgttttgtagcaatgaaatcctcgatttgttt
cgaagctctaagtatgtcatcaggatttcaagagaaacatttggaatgctaaagaaatac
cttcaggaaaatcaaagagacgtcattctaaacataatccagcagcacttccatctggat
gtctttgatggccgtccaaggaaaaagcggaatcttggggcaggaacagggggaatatct
ggtgaagcaccgcagtatgcaaacaatgcaaaggttttttacggccttattcacgatcct
gaattgaatgcctctttggaagaggacagtgacgaggaggaagacaaagaaaaaccaaag
aaaaaaaagtcaaaaagagatgaagcgaaaaaaagacaagccacagaccctcatgcacca
aaaccagagaggatttcttttccgagtttgaaggacagtgacaaaagactaaaacttgca
aagtacaaagaattattgaagcgtctgcatgttggcccaaacagccttccatccatttgc
ttctacacggtcctaaacgcaagtcaaggactgaatgtcatcgagtttagtgatgattcc
aagatgcttgctgctgggttcgatgactcttctattaaattatggagtcttacgcctcga
aaattgcgaacactaaaagctccttatgaactagcaaggattgacaaagaggctgatgat
gttttggaaaggataatgaacgaaagatcagcaacggagcaaaaaacattgcttggtcac
agtgggccagtttatggcttgagtttcaacgaaaacaattcatttcttgtatcgtcgtca
gaagatggaactgtccgtctttggagtttgcacacttttacaaatcttgttgtctataaa
ggccacacattcccagtgtggagtgtcaaattctgcccaaaaggattttattttgcgtca
gtatcagctgacagaacagctcgtctttggtcgacagattctcacacaccactgcgaatc
ttcgctggacacttagctgatttgaatgctatcgatttccatcctaactgcaactatatc
gcaactggttcttcagacaggacagttcgtgtgtgggatattcttactggcaattcagtg
cgtctgttcactggccataagggtgccgtgcatgctgttgcgttttctcccgatggaaag
catcttgtttcgtcaggtgtcgataaaagaatattattgtggaacatagcagatggtgtt
ccagtaatcgatttaacaggccacacggaggcagtatttgcccttagcttcagccgggat
ggtcacgtgctcgcttcaggtggagttgacaattgtttgaaattttgggatataaaacgc
gcttgtaaaatggaggacgacgaggaaatggaccagttcgaaaacaacgaatcagctttt
gaaatggcctcgtttctgaccaaatcaacaccagtccactcaattcactttacaaggaag
aacctcgttttagcatctggaccgtttgtatcttcgcattag

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