Rhopilema esculentum: 135681997
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Entry
135681997 CDS
T09994
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
res
Rhopilema esculentum
Pathway
res03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135681997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
res03021
]
135681997
03036 Chromosome and associated proteins [BR:
res03036
]
135681997
Transcription machinery [BR:
res03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135681997
Chromosome and associated proteins [BR:
res03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135681997
PBAF complex
135681997
GBAF(ncBAF) complex
135681997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
SpeFL
DUF919
Chromo
BRCT_2
Motif
Other DBs
NCBI-GeneID:
135681997
NCBI-ProteinID:
XP_065052765
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MAVRKKDGGTNWKYYEALDTIELFDPVRLHLIKNYKKYVQADPPTNKSLATLTGQLVQFQ
EEAFGKNVSKPALTRLPMKQFLDYSSGGSLCHIIGACYKFKVDQGWRRFDFQSPSRMDRN
VELCLTIEKTLRENKLLERPKVFIINEMDSKQSSKLRDIVKRHQGTLVDSKEKATHIIHP
APSLTAEEEWLRPLVKRDKQVLVHWWYHPDSYDSWVPISEVSQEPEPTPERSKPWELHAR
WLSDLDLFNEWMNEEDYEIETPDQGKVQLYSRTNATKRFLVMFSTNLFYLYTKCFICRVS
GKTRRKCLKGKPNAEEVNNDEKKKELRKRKASPSPSPEQGKRKKKGPKKKDDEKPERDED
HDDATNELPEPEAVPNVTKEEMDSGLVANINKQNTLEDISSNTPSKGTKDQDQEMAAASP
APSQDGKDSKKLNETVNREPEVPHDDNLPEQTRHIIIPSYAAWFDYSSIHAIERRALPEF
FNGKNKSKTPEIYFASRNFMIDTYRLNPTEYFTATAARRNLAGDVCAIVRVHAFLEQWGL
INYQVDADNRPLPMGPPPTSHFHVLCDTPSGLQPLSGSKPPISAAQQLINLADKDSNGTK
VQDGNNFGLRTDVYLTKKNLKSKSAAYKEWMDQETLLLLEGLELYKDDWNKVAEHVGSRT
QDECILHFLRLPIEDPYVEEGSSFLGPLSYQPIPFSQAGNPIMSTVAFLASVVDPRVASA
AAKAAIEEFSRLKEEIPSSLIDAHLTKGKKPIENGENAPETAETTSEDSKKKKDEDSKTT
SDSSKEGGETVTNGVDHPEESAVKNEDKDEEMPNEDEKEKEEKKPKEISPELAKRSEELL
QKRDELKDGNIKTAASVALSSAAVKAKHLAQVEERKIKSLVALLVETQMKKLEIKLRHFE
ELETIMERERELLEQQRQQLLAERQQFFMEQIQMSETSAKNAEKSVSHPQAPAAVLTNAP
AATSSTWDSTALQTQKPASEPVGLKPATEKEESRDSLPVASVASSKSTPTSLSSPFSAPD
KVSEPVTSQPQSQQQAQSQQQQQLQHHQQQQQAQQQQLSKSQESMMPNPAISQTNPMFQS
GGGVTDQPPNLMPQEAKPPSSNPVQMQQFPPGVPNMGGPQRLPQQRRPPMQSQGYPNPNQ
MVPGPMSGGLSVAPGTSAQYSYASGFQNQQMGMMSQGMQPPAYPNQNNPMMQAGMNMMQQ
GGPPMNMGPGQYQHGQYGPSFPQM
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggctgttagaaaaaaggatggtggaacaaactggaaatactacgaagcattggatacc
atcgagctattcgatcctgtgcggcttcatctcatcaaaaattacaaaaagtatgtacag
gcagatccaccaacaaacaaaagccttgctactttgactggacagcttgtgcaatttcaa
gaggaagcatttggcaaaaatgtaagcaaaccagctttaacaagattaccaatgaagcag
tttttagattattcatctggtggatcactttgtcatataattggtgcatgttacaagttc
aaagttgatcagggatggagaagatttgactttcaatcaccttcaagaatggatagaaat
gttgagctgtgtttgactatagaaaaaactcttagagagaacaaactgcttgaacgacca
aaagttttcattataaatgaaatggattccaagcaatcttcaaaattaagagatatagtt
aagagacatcagggaacattagtagacagcaaagaaaaagcaacacatattatacatcca
gcaccatcattgactgcagaagaggagtggctacgtccgttggtgaaaagagacaaacaa
gttttggttcattggtggtaccatcctgatagttacgattcttgggtacccatatctgaa
gtatcacaagaacccgagccaactcctgaaagatccaagccttgggagttgcatgcaaga
tggctgtcagatttagatttatttaatgaatggatgaacgaagaagactatgaaatagag
acaccagatcaaggtaaggttcaactttattcgcggacaaacgccacaaaaagatttctg
gtaatgttttcaactaatttgttttatctctatacaaaatgctttatttgtcgtgtttca
ggaaaaacgcgccgaaaatgcttgaaaggaaaaccgaacgcggaagaggtcaacaatgat
gaaaagaagaaggaacttcgaaaacgcaaagcttcgccttctccatcaccggagcaagga
aaaaggaaaaagaaaggcccaaagaagaaagacgatgaaaaacctgaaagagatgaggat
catgatgatgccacaaatgaactaccggaacccgaagctgtcccaaatgtgacgaaagaa
gaaatggatagtggcctggtggcaaacatcaacaagcaaaatactctggaagacatttca
agtaatacaccgagtaaaggcaccaaagaccaagatcaggagatggctgctgcgtcacct
gccccgtcacaggatggcaaggacagcaaaaagctgaacgagactgtaaacagagagcct
gaggtgccacatgacgacaacctgcctgaacaaacaagacacattatcattccaagttat
gctgcctggttcgattacagcagtatacacgcaattgagcggagagcattacctgagttt
ttcaatggaaaaaacaaatcgaagactcctgaaatatatttcgcatcgagaaattttatg
attgatacctatcgcctgaacccaaccgaatactttacggcgacagctgcaaggaggaac
cttgccggtgatgtttgtgccattgttagggtgcatgcattcttggagcaatggggcctt
ataaattatcaagtagatgcagacaacaggccgctgccaatgggacctcctccgacttct
cattttcatgtcctatgcgacacgccatccggtctacagcctttgagtggatcaaagcct
cctatttcggctgctcagcaattaataaacttagctgataaagacagtaatggcactaaa
gtacaagatgggaacaacttcggcctgagaactgatgtttacttgaccaagaaaaatctt
aaaagcaaatcagccgcttacaaagaatggatggaccaagaaacgctgttgcttttagag
ggcctcgagttgtacaaagacgactggaacaaagtagcagagcacgttgggagccgaacg
caagacgaatgcatcttgcactttttacgtcttcccattgaagatccatacgtcgaagag
ggctccagtttccttggcccgttatcgtatcagccaattccgtttagtcaagctggcaat
cctatcatgtcaacagtggcatttcttgcctctgtcgtcgacccaagggttgctagtgcc
gctgcgaaggctgctattgaagagttcagtcgcctaaaagaagagattccaagtagcttg
atcgacgcacacctcacgaaaggaaagaagcccattgaaaatggtgaaaatgcaccagaa
acagctgaaactacgtcagaagacagcaaaaagaagaaagatgaagactcaaaaactaca
agtgattccagcaaagagggcggagagactgtgacaaatggggttgaccatccagaagaa
agtgccgttaaaaatgaggataaggatgaagagatgccaaatgaagacgagaaagaaaaa
gaagagaaaaaacctaaagaaatatctccagagctagcgaaaaggtcggaagaattgtta
cagaagagagatgaactgaaagatggaaacatcaagacagcagcttcggttgcgctgagt
tcggccgctgtaaaggcgaagcaccttgcacaagtagaggaacgcaaaatcaagagtttg
gttgcactgctggtcgagacacaaatgaaaaagctagaaattaaactgcgccattttgaa
gaacttgaaacgataatggaaagagaacgagagctgcttgaacagcagaggcagcaattg
ctcgccgaaagacaacagttcttcatggaacaaattcaaatgtcagaaacatcggcaaaa
aacgcagaaaagtcagtaagccacccccaagcaccagctgctgtcctcacgaacgccccg
gctgcgacgtcttctacgtgggactcaacagccttgcagacccaaaagcctgcctcggaa
cccgtaggacttaaaccagctactgagaaggaggaatcaagagactcgttgcccgtggca
tctgtagcatcctccaagagcacgcctacgtcactcagttctccgttttcagctcctgat
aaagtttcagaacccgtgacatcacaaccacaatcacaacaacaggctcagtcgcaacaa
cagcaacagctccagcatcaccaacaacaacagcaggctcaacaacaacagctttcaaaa
tcgcaggaatcaatgatgcctaaccctgcaatatcgcaaacgaaccccatgttccaaagt
ggcgggggagtcacagaccaaccacctaacttgatgccacaggaagcaaaaccgccttct
tctaaccctgtgcaaatgcagcagttcccacctggcgtcccaaatatgggagggccacag
cggctgcctcaacagcggagacccccaatgcaatcccaggggtatcctaatcctaatcag
atggtcccaggcccaatgtcgggtggtttgtctgttgcaccagggacctcagcgcaatat
tcatatgccagtggctttcagaatcaacaaatgggtatgatgtcacagggtatgcaaccc
ccagcctacccaaaccaaaacaatccgatgatgcaagcaggtatgaacatgatgcagcaa
ggtggaccaccaatgaacatgggacccggacagtatcagcatggtcaatacgggccttcc
tttccccagatgtaa
DBGET
integrated database retrieval system
