Rhopilema esculentum: 135682079 Help Entry 135682079         CDS       T09994                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism res  Rhopilema esculentum Pathway res04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:res00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     135682079  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:res00536]     135682079 Glycosaminoglycan binding proteins [BR:res00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    135682079 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  135682079 NCBI-ProteinID:  XP_065052875 LinkDB All DBs Position Unknown AA seq 1846 aa AA seqDB search MEMRIVILAVCVAFASAKTNVKRSPNPFPCGMSCAPSCAPACAPSCCAPPPPPPPPPPPP PPPPPPIMCCAPPPPPPPPPPPPPPPPPPPPPPMPGPPGPPGPAGHPGGPGGPGPMGPPG GPGGPGPMGPMGPAGPPGPPGAPAPPPPPCPPICVHHCMKVCPMPCCAPPPPPPPPPPPP PPPPPPPPPPPPPPPPPPMCCPPPPAPPPPMCSVCGLILSDQYYSRIAERKPGTRAKNMR FLLSILAACLALASARHLTNRNHLHHLVKRHPRPQCDAPCAAPVSCAPSCLPVCCLAAPP PPPPPPPPPPPPPPPPPPPPPPPPPALPGPPGPPGRPGPLGLPGGSGPMGPGGPAGPSGG QGPSGPPGPPGIALPGPGGPPGGPGPGGPPGPGGPPGPPGGPGQPGPPGPPSPPQAGPSG PPGGPGPLGPPGPGGPPGPPGGPGQPGPPGPPAPPAPPGPSGPPGGPGPLGPPGPGGPPG PPGGPGQPGPPGPPAPPAPPGPLGPPGGPGPLGPPGPGGPPGPPGGPGPFGPPGPPSPPP PGPPGPPGGPGPLGPPGAGGPPGPPGGPGQPGPPGAPAPPAPPGPQGPPGGPGPLGPPGP GGPPGPPGGPGQPGPPGPPAPPAPPGPLGPPGGPGPLGPPGPGGPPGPPGGPGQPGPPGP PAPPIPGPLGPPGGPGPLGPPGPGGPPGPPGGPGPAGPPGAPAPPAPPGPLGPPGGPGPL GPPGPGGPPGPPGGPGPGGPPGPPAPPPPGPQGPPGGPGPGGPPGPGGPPGPPGGPGQPG PPGPPAPPAPPGPLGPPGGPGPLGPPGPGGPPGPPGGPGPAGPPGPPAPPAPPGPLGPPG GPGPLGPPGPGGPPGPPGGPGPGGPPGPPAPPPPGPQGPPGGPGPGGPPGPGGPPGPPGG PGQPGPPGPPAPPAPPGPLGPPGGPGPLGPPGPGGPPGPPGGPGPAGPPGPPAPPAPPGP LGPPGGPGPLGPPGPGGPPGPPGGPGPAGPPGPPAPPAPQGPQGPPGGQGPLGPPGPPGP PGPPGPPGAGGPPGQPAPPPPPCPPICPNRCIASCPIYCCPAKRRRKCVYAATVKMWLKI SIVVLAVASVAYARSIENGMKRQGVCPAQCAINCAPVVCAPVCCAPPPPPPPPGPPGPPG PNGPPGPPGPNGPPGPGGPPGGPGPAGPPGPAGAPAGPPGPAGNPGPLGPPGGPGPQGPP GPPGPPGPPGRPGPPAPPPPPPPCPLICQTVCTPACPPACPCRKRNRNFCSGFSDYKIEN TSRARKSTGKMQAMQFAPANVHVWKRLLVKMLLQISAALVTISMVSAYNIPSSLKKRQGI CPASCFVNCAPVVCPPVCCAPPPPPPPGPPGPPGINGPPGPPGFNGPPGPPGPPGGPGLP GPPGPPGAAAGPPGTPGGPGPNGPPGLPGPPGPPGPPGPLGPPGPQGPPAPPPCPVICQT FCAPVCPPACPCPRRRKCANAKKDVSKNDLQERSIPTTVKYVKQMKLQIFVAVCIVAVVS GRTIQRAGSKRQLCPNACPATCAPACMPICCAPPPPPPPPPPPGPPGPPGPNGPPGPSGP NGPPGPGGPPGGQGPAGPPGPPGAPAGPPGPAGNPGPLGPPGGPGPQGPPGPPGPPGPPG RPGPPAPPPPPPPCPPVCVTTCVPACPPACSFIAIFLLRTVKGCTTRPRDFINFKMMRIA VFVAVLGVALAGLPRHKDKRSPQACGAACPATCAPACMPICCAPPPPPPPPPPPGPPGPP GPNGPPGPSGPNGPPGPGGPPGGPGPAGPPGPPGAPAGPAGPAGNPGPLGPPGGPGPQGP PGPPGPPGPPGRPGPPAPPPPPPPCPAVCVAQCVPSCPPPCCPQKH NT seq 5541 nt NT seq  +upstreamnt  +downstreamnt atggagatgaggatagtcatcctcgcagtatgcgtggcttttgcctccgcaaagactaat gtcaagagatcaccaaatccattcccatgtggaatgtcatgtgctccttcttgcgcacca gcctgtgcaccatcatgctgtgcaccaccgccaccacctcctccaccacctccaccacca ccaccacccccaccaccaattatgtgctgtgcacctccaccaccaccacctcctccacct ccaccaccacctccaccaccaccaccacccccaccaccaatgccaggtccaccaggacca ccaggaccagctggacacccaggaggcccaggaggaccaggaccaatgggaccaccagga ggcccaggaggcccaggaccaatgggaccaatgggaccagcaggaccacctggtccacct ggtgccccagctccaccaccaccaccatgcccaccaatctgcgttcaccattgtatgaag gtatgcccaatgccatgttgtgcaccacctccaccaccaccaccacctcctccaccacca cctccaccaccaccaccacccccaccaccaccacctcctccaccaccaccaccaatgtgc tgcccaccacctcccgcaccaccaccaccaatgtgctcagtctgcggtctgattttaagc gatcagtattactctcgcatcgcggagaggaaaccgggcacacgagccaaaaatatgagg tttcttctcagcatactcgctgcctgcttggcactagccagcgcaagacacctaacgaat cgaaaccatttacatcatttggtaaaaagacatcctagaccacaatgtgatgcaccatgc gctgctccagtatcctgcgcaccatcatgtctaccagtttgctgcttagctgcaccacct ccaccacctcctcccccaccacctccaccaccccctccacctccacctccacctcctcca ccaccaccaccacctgctttaccaggaccacctgggcctccgggtagacctggaccactt ggattgcctggtggatctggcccaatgggacctggtggaccagcaggaccatcaggaggg caaggtccatcaggacccccaggacctcctggaatagcacttcctggcccaggtggacca ccaggaggacctggacctggtggaccacctggacctggaggacctcctggacctcctggt gggcctggacaaccagggccacccggacctccatcaccacctcaagctggaccatctgga cctccaggtggacctggacctttaggacctcctggacctggtggacctcctggacctcct ggtggaccaggacagcctggacctcctggacctccagcaccacctgcaccacccggccca tcaggacctcctggtggacctggacccttaggacctcctggacctggtggacctcctgga cctcctggtgggcctggacagcctggacctcctggacctccagcaccacctgcaccacct ggcccacttgggcctcctggtggacctggacctttaggaccccctggacctggtggccca cctggacctcctggtggaccaggaccttttggacctcctggacctccttcacctcctcca cctggcccaccaggacctcctggtggacctggacccttaggacctcctggagctggagga cctcctggacctcctggtggccccggacaacctggtcctcctggagctcctgctccacct gccccacctggtccacaaggacctcctggtggacctggacccttaggacctcctggacct ggtggaccccctggacctcctggtggccctggacaacctggaccccctggacctcctgct ccacctgcaccacctggccctctaggaccacctggtggacctggacccttaggacctcct ggacctggtggacctccaggaccccctggtggacctggacaacctggaccccctggacca cctgcaccaccaataccaggtcctcttggacctcctggcggacctggacctttaggacct cctggacctggtgggcccccaggacctcctggcggaccaggacctgctggacctcctgga gctcctgccccacctgcacctcctggtcctttaggacctcctggcggacctggaccctta ggacctcctggacctggtggacctcctggacctcctggtggacctggaccaggtggacca cctggaccacctgcaccaccaccacctggcccacaaggacctcctggtggacctggacct ggtggacctcctggacctggtggacctcccggacctcctggtggaccaggacaacctgga cctcccggacctccagcacctccagcaccacctggcccacttggacctcctggcggacct ggacctttaggaccccctggacctggtgggcctcctggacctcctggcggacctggacct gctggaccacctggacctccagcaccacctgcaccacctggcccacttggacctcctggc ggacctggacctttaggacctcctggacctggtggacctcctggacctcctggtggacct ggaccaggtggaccacctgggccacctgcaccaccaccacctggcccacaaggacctcct ggtggacctggacctggtggacctcctggacctggtggacctcccggacctcctggtgga ccaggacaacctggacctcccggacctccagcacctccagcaccacctggcccacttgga cctcctggcggacctggacctttaggaccccctggacctggtgggcctcctggacctcct ggcggacctggacctgctggaccacctggacctccagcaccacctgcaccacctggccca cttggacctcctggtggacctggacctttaggaccccctggacctggtggacctccggga ccccctggtggacctggaccagctggaccaccaggacctcctgctcctcctgcaccacaa ggaccacaaggacctcctggtggacaaggaccattaggaccgcctggaccacctggacct cctggaccacctggacctccaggagctggtggaccacctggccaaccagcaccacctcca ccaccatgcccaccaatctgtccaaatcgatgtatcgcttcatgtccaatctactgctgt ccagccaagagaagaagaaagtgtgtatatgcagctactgtaaaaatgtggctaaagatc tcaatcgttgtcttggcagtcgcctcagtggcatacgcccgaagcatcgaaaatggaatg aaaagacaaggagtctgtccagcacaatgcgcaattaactgcgctccagtcgtctgtgct ccagtttgttgtgccccaccaccaccaccaccaccaccaggcccaccaggaccaccagga ccaaacggacccccaggaccaccaggacctaacggaccaccaggaccaggaggacctcca ggaggaccaggacccgctggaccacccggaccagcaggagccccagctggaccaccagga cctgctggaaacccaggaccacttggacccccaggaggaccaggaccacaaggaccaccc ggacctccaggaccaccaggaccacctggacgaccaggacccccagctccaccaccacca ccaccaccatgcccacttatctgccagaccgtatgcacacctgcctgtcctccagcatgc ccatgcagaaagagaaatcgaaatttttgctctggtttttccgattacaaaattgaaaat acaagtagggctagaaagagtacaggaaaaatgcaagcaatgcagtttgccccggcaaac gtacacgtttggaagcgtcttttggtcaaaatgttgctgcagatctctgctgccctggtc accatctccatggtatcggcatataacataccaagctctttaaagaaaagacaaggaatc tgccctgcatcgtgttttgtaaattgtgcaccagtcgtctgccctcctgtttgttgtgct ccacccccaccaccgccaccaggtccaccgggaccacctggaattaatggacctccagga ccacccggctttaacggaccaccaggacccccaggaccacccggaggaccagggcttccc ggaccccctggtccaccaggagcagctgcaggaccgccaggaacaccaggcggaccaggt cccaacggaccacccggacttccaggaccaccaggaccaccagggcctccaggcccactc ggccccccaggaccacaaggccctcctgcaccaccaccatgtcccgtcatctgtcaaact ttctgcgcgccagtatgtccaccagcttgtccatgcccacgaagaagaaagtgtgctaac gcaaaaaaggacgtttctaaaaatgatctacaggagcgaagcattccaactactgttaaa tatgtcaaacaaatgaagctccaaatcttcgtagcagtctgcattgttgcagttgtaagc ggcagaaccatccagagagctggatcaaagagacagttatgtcctaatgcatgcccagcc acttgtgcaccagcatgcatgccaatctgttgtgctccaccacccccaccaccaccacca ccaccaccaggcccaccaggaccaccaggaccaaacggacccccaggaccatcaggacct aatggaccaccaggaccaggaggacctccaggaggacaaggacccgctggaccacccgga cccccaggagccccagctggaccaccaggacctgctggaaacccaggaccacttggaccc cccggaggaccaggaccacaaggaccacccggacctccaggaccaccaggaccacctgga cgaccaggacccccagctccaccaccaccaccaccaccatgcccacctgtctgtgtcaca acttgtgtaccagcctgcccaccagcttgctcattcattgccatctttctactgaggaca gtcaagggttgcacaaccaggccccgcgattttataaatttcaaaatgatgagaatagct gttttcgtcgccgttcttggcgttgccctcgctggcctcccaagacataaggataagaga tcaccacaagcttgtggagctgcctgtccagccacttgtgcaccagcatgcatgccaatc tgttgtgctccaccacccccaccaccaccaccaccaccaccaggcccaccaggaccacca ggaccaaacggacccccaggaccatcaggacctaatggaccaccaggaccaggaggacct ccaggaggaccaggacccgctggaccacccggacccccaggagccccagctggaccagca ggacctgctggaaacccaggaccacttggacccccaggaggaccaggaccacaaggacca cccggacctccaggaccaccaggaccacctggacgaccaggacccccagctccaccacca ccaccaccaccatgcccagcggtctgtgtcgcacagtgtgtgccatcatgcccaccacca tgctgtcctcagaagcactaa

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