Rhopilema esculentum: 135682127
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Entry
135682127 CDS
T09994
Name
(RefSeq) small subunit processome component 20 homolog isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
res
Rhopilema esculentum
Brite
KEGG Orthology (KO) [BR:
res00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
res03009
]
135682127
Ribosome biogenesis [BR:
res03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
135682127
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_GCN1
BP28CT
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
135682127
NCBI-ProteinID:
XP_065052934
LinkDB
All DBs
Position
Unknown
AA seq
1810 aa
AA seq
DB search
MYKAYLQLLMHRENEIQQHVYNCLKTYKFPYLKPYEEQFDKLLQDNTFKDALTLFAAGDE
VEMVKKDHRNDVINILIRLLYGKLQRRSGLGVSGKSSQSARRNIIINFISCCPEEELTTF
VNLITEPFKDSKKDSIHEVIPLRKQIGFLHMLHTILTRLSGLIVPHVDHLLKTLLDILEK
CQMCLERRNQINSTFIGQLKSIRQLSISRITEFFEILPDFDFLPYVDMIFINAVMPQISR
LHQESQQHPSPLLKLLYHWSTSPKYYEWLNKDLRCFHIKASSLQTEEAGALRETTVVPVS
NDLQTETPLRFILKILGVKDKSETVVKMLMKMVQSIIQMKANGDDDDDAIEGVERGDNAL
RSSALKMIDGHIDNLLNHLFEAVKRKTGAQLSKIKAKDETFQAELSVLALISSFVTDPSQ
CQTVVSILFPTLKWIKNETDQVNTLITVKNLVKHCGNTRQIAVETMNLFMSLKERKPRTI
LCELFQVVFDSSEICCIIRDMNSWDKKFVDEPDFELRFQAFSRATSMLKAVDLSSKQIKP
VLANCLYFSLEVQDMSLRDVSISFIIHMIDFIKASGSRVVVDDLLTGLLLPVVRKAVRSK
NEIVRGEYTKILSRVVKHIDESSVSDMRILTNEDPEVDFFENVRHIQMHRRIRAVRHLAQ
LSKEGKLKQNSLYAFLLPLISNFIFDNVASKDHNLVTATIEAMGAIVHALPWQRYSHVLR
NYLRLLPKEKAKKKIIIRVVVAVLDAFHFDMTMLSDDDIKPAPHSGELLLDFIEKVNQKK
VAEGIQDLDNGAIIKENENAVEDEDNEDEDEADMADNNHDQDCKKNESTSAMKIHKTILT
TILPQLHKSLVKKSFVEDFHRKSRNKEIDDDAVLRVPIALAIIKLLQKLPKSTLHEQLPG
VLLRVCQTLKSRAREVRETARETLVHIASSLGPEYFPYVLKEMKSTLQRGYQLHVLAFTL
KSIFDALFDQLKPGDLDQSLASIIEVMMQDVFGNIAEEKEVEGITGKLHEAKTTKSYDSF
EIVSQFVSPASLGNLLKSVRVLLETSHTHKVSNKAKEVLRRIGVGLQKNSSLSLTDLLVF
IHQTLSGLQPVIMESNSKELRKEKEGEEFRRQDIYLVKKEPGRGQKIVEHDKKANLHLLG
EFCLQLLHSFLKNQKLMPSNQEHIRMLDPYVTVLIQCLKSKYNRIIILAAKSMALLIRFP
LPSLQTNTKTLATLLFKLLKNYARIGAGTGDNYELVLSTFKAMTVIIRDNKHYKVTEEQL
KILLAFVEEDVYDYTRQATAFPLLKAILSRKLNAKEIVDVMKKVAELSVTSESDSVQLQC
RQLMLQYLLDYPLGKNIEKHLQFYVSNLGYDIESGRRSALEMMAVLIKNFPEERINEYSS
YFYFPLAMRLINDESALCRKLSNAVLKTLLQRTNAEKRTELLELTLKWLQQEKVSVQRLA
MQIIGIFAEVEGAAFEKRLSAILQSINSAIKPSSYTAPDDYDDQSNEMKSKDQFLFNTLT
ALMKIFQNCDVIRKISFQESLTEIWGSIQAHLQYPHTWVRLVSSQLFGFLFASWPPSELV
TFSREGAANRFYITDDLPSKVKLLCKDFCDQLKSENLSQEFGEQITKNLIYLIKLINLSS
QDFKVANGADANSVEEKGGKGDGSASTLSTLRWLLNKLSNLASFEASQEQKAQIKRMCVF
RCLAAVSIDLGKDGITPYISEILKPLHRELVSSSPESELYKLALEVIELIKEVVGKEVFA
EIYAKVQRKVSEKKEFRKRKNAEEAVVAPEKFAKKKQKKNLQKRDQRKRKLIEKKPSLLK
GNKRTKNQPI
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagcttacctacagcttctaatgcatcgggaaaatgaaatacaacagcatgtt
tataactgcctgaagacgtacaagtttccttacttgaaaccttatgaggagcagtttgat
aagctgttgcaagataatactttcaaagatgcgcttacgctttttgcagctggagatgaa
gtagaaatggtcaagaaagaccaccgaaatgatgtcattaatattcttatcaggttgctt
tatggtaagttgcagaggcgatcaggactcggagttagtggtaaatccagccaatcagca
agaaggaacataatcatcaacttcatttcttgttgcccggaggaagagcttactaccttc
gtcaacttaataaccgaaccatttaaagacagcaagaaggacagcatacatgaagtaatt
ccactacgaaagcaaattggctttctccatatgctgcatacaattctgacaagactgagt
ggcctcatcgttccacatgtcgatcatttgctgaaaactcttctcgatattcttgagaaa
tgccagatgtgccttgaaagacgcaaccaaataaactcgaccttcatcggacagctgaaa
tcaattcgacagttgagtatctcaagaatcacagagttttttgaaatattgcctgatttt
gatttcttgccgtatgtcgacatgatcttcataaatgcagtgatgccacagatttctcgc
ctgcatcaagagtcgcaacaacacccttcacctctgttaaagctcctttaccattggagt
acgtcacccaagtattatgagtggctgaataaagatctaagatgctttcacatcaaagca
tcgtcactacaaacagaggaggcaggtgctttacgcgagaccactgttgtgccagtttca
aatgatctgcagacagaaactcccctgcgctttatacttaagatcctgggcgttaaagac
aaatcggaaactgttgtaaagatgttgatgaaaatggtgcaaagtattattcaaatgaaa
gcaaatggtgatgatgatgatgatgccattgagggtgtagaacgaggggataatgcatta
cgaagttctgcgctaaagatgattgatggccacattgataatctgctgaaccatctcttc
gaagcagtcaaacggaagacaggagcacagctatccaagatcaaagctaaagacgaaacc
tttcaagcagaactgagcgtcttggctcttattagctcatttgtgacagatccctcgcag
tgccaaacagttgtttctattttatttccaacactgaaatggataaaaaatgaaactgat
caagttaatacgttaatcactgtgaagaaccttgtaaagcattgtggaaatacacgacag
atagccgtcgaaacgatgaatttgtttatgagtctaaaggaaagaaaaccaaggactatt
ctctgtgaattgtttcaggttgtatttgattcgtccgaaatatgctgcatcattcgtgac
atgaattcttgggataagaagtttgttgatgaacctgatttcgaactacgtttccaagca
ttcagcagggcaacatcgatgctcaaagcagtagatctctcaagcaagcaaatcaagcca
gttttagccaattgcttgtacttttcattggaagttcaggacatgtcgttgagggacgtg
tccatcagtttcattatccatatgattgattttatcaaagctagtggcagtagggtcgtt
gtcgatgatttgctaactgggctgcttttgcctgttgtcagaaaggctgtgaggtccaag
aatgagattgtgcgaggcgagtacaccaagattctctcaagggttgttaaacatatcgac
gagtcttcggtttcggatatgagaattttaacaaacgaagatccagaagttgatttcttt
gagaacgtcaggcacatacagatgcaccgcagaattcgagctgttagacatctagcacag
ctgtcgaaagaaggaaagctaaagcaaaattccctctatgcctttctgcttccactcatc
agcaattttatcttcgataacgtggcatcgaaagaccataaccttgtcacggcaaccata
gaagcaatgggagctatcgtgcatgctttgccctggcagcggtattctcatgtcttgaga
aattatttacgtctattgccaaaagagaaagccaaaaagaaaataatcataagagttgtt
gttgctgttctggatgctttccacttcgacatgacgatgttaagtgacgatgatatcaag
ccagcgccacattcaggggaattgctattggattttatagaaaaggtgaatcagaaaaag
gtggcagaaggaattcaagacctggacaatggagctatcataaaggagaatgaaaatgca
gtagaagacgaagataacgaggatgaagatgaagctgacatggcagacaataatcatgat
caagattgtaaaaaaaatgaatctacatcagcgatgaaaatacacaagactattctgaca
acaattttgccacagctgcataaatctctcgtcaagaagtcctttgttgaagatttccat
cgcaagtcacggaacaaggagattgacgatgacgcggtgcttcgggtaccgattgcactt
gccattatcaaacttctacagaagcttcccaaatcaacattacacgaacagctgcccggt
gttctattacgtgtttgtcagaccttgaaaagcagagcccgagaagtcagagaaacagct
cgggagacattagtgcatatagcatcgtcgcttggcccagagtactttccttatgtgctc
aaagaaatgaaatcgactttgcaacgaggctatcagttgcatgtattggcgtttacactt
aaatcaatatttgacgccctgtttgatcaactgaagccgggtgatttggatcagtctctt
gcaagcattattgaggttatgatgcaagatgtgtttggaaatattgctgaagagaaggaa
gttgaagggataactggaaagcttcatgaagccaagacgaccaagagctacgattccttt
gaaatagtgtcacagtttgtatctcctgcatccttgggaaaccttttaaagtcagtgaga
gtgctgctagagacctctcatacacacaaggtgagcaacaaagccaaagaagtgctgcgg
agaatcggtgttggcttgcaaaagaattcctcgttgtctttgactgatctcttggtcttt
attcatcaaacactttcgggtttgcagcctgttattatggagagtaattctaaagaatta
aggaaggaaaaagagggggaagaattcagaagacaagatatatatctagttaaaaaggag
cctgggcgtggacagaagattgttgaacacgataaaaaggccaatttgcatcttttagga
gagttttgtctgcagttgttgcattcatttctgaaaaatcaaaagctgatgccctcaaac
caggaacacataagaatgcttgatccgtacgtgacagttcttattcaatgcctcaaatca
aagtacaatcggattataatacttgctgccaaatccatggctcttttgattcgtttcccc
cttccgtcgcttcaaaccaacacgaaaactttagctacattgctgttcaaactactgaag
aattacgcaagaattggcgctggaacgggggacaactacgagcttgttctatcaacattt
aaggctatgacggtcattatccgggacaataaacactataaagtgacagaagaacaattg
aaaatcttgcttgcattcgttgaagaggatgtttatgactacacaagacaagcgacagca
ttccctttgttgaaggcaattttatcacgcaagttaaatgcaaaggagattgttgatgtt
atgaaaaaagtggctgagctttcagttaccagtgaatcggattcggtacagcttcaatgt
cgacagctgatgttgcagtatcttcttgattacccacttggaaagaacattgaaaaacat
cttcagttttatgtttctaacttagggtatgatattgaaagtgggcgacgatctgcgttg
gagatgatggccgttttgataaaaaactttccggaagaacgcattaatgaatactccagc
tatttctattttcctcttgccatgcggctgatcaatgacgaatctgctctctgtcgaaaa
ttatcaaatgctgttctgaagactttgttacaaaggactaacgccgagaagaggacagaa
ctccttgagctgactttgaaatggctgcagcaggaaaaggtatcggtgcaaaggcttgct
atgcagattattggaatatttgctgaagttgaaggagcagcattcgagaaaaggctgtct
gcaatattacaaagtataaacagtgctattaagccatcatcatacacagcccctgatgat
tatgatgatcagtccaatgagatgaaatcaaaggatcagtttcttttcaatacgttgact
gccctcatgaaaatttttcaaaactgtgacgtcatcaggaagatttcgtttcaagaatct
ttaactgagatttggggcagcatccaggctcatttgcagtacccacatacctgggtgcgt
ctggtatctagtcagttatttggtttcctttttgcttcgtggcccccttctgaacttgtt
acgttttcaagagaaggtgctgcaaaccgattctatatcacggatgatcttccgtccaag
gtaaaacttctttgcaaggatttttgtgaccaattaaaatcggagaacctgagccaagaa
tttggggaacagatcaccaagaatctaatttatttgataaagctgataaatttgtcaagc
caagattttaaggttgcaaatggagctgatgcaaactcagtagaagaaaaagggggcaaa
ggcgatggcagtgccagcacactgtctacattgcgatggcttctgaacaaattatccaat
ttagcaagctttgaagcatcgcaagagcaaaaggctcaaatcaagcgaatgtgcgtattt
cgatgcttggctgctgtttcgattgaccttggaaaagatggtatcaccccgtacatatca
gagattctgaaaccccttcatagagagcttgtcagttcttcaccagagtcagagttgtac
aagttagcattagaggttatagaattgatcaaagaagttgttggaaaggaggtttttgca
gagatatatgccaaagttcagaggaaagtatccgagaaaaaggaattcagaaaaagaaaa
aatgcagaagaggctgttgttgcccctgagaagtttgcaaagaagaaacagaagaagaat
ctccaaaaaagagatcagagaaagcgaaaactgatcgaaaaaaagccatctttgctgaaa
ggcaataaaagaacaaagaatcaaccaatttaa
DBGET
integrated database retrieval system
