KEGG   Rhopilema esculentum: 135682220
Entry
135682220         CDS       T09994                                 
Name
(RefSeq) splicing factor 3B subunit 1-like isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
res  Rhopilema esculentum
Pathway
res03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:res00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135682220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:res03041]
    135682220
   03036 Chromosome and associated proteins [BR:res03036]
    135682220
Spliceosome [BR:res03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    135682220
 Complex B
    135682220
 Complex C
   U2 SnRNP specific factors
    135682220
Chromosome and associated proteins [BR:res03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    135682220
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG HEAT_Maestro Condensin2nSMC DUF2298
Other DBs
NCBI-GeneID: 135682220
NCBI-ProteinID: XP_065053079
LinkDB
Position
Unknown
AA seq 1335 aa
MATTEEMIESHIKKLQAERQNQNGGQKESSGVAFGKAAESDLYGDENAYAGYVTSIAPNE
QDEDDGDQAATLGGGKLPSFTAPTNIYKDIQKESEDIDPMAAYKRPTIADREDEYRARRR
QMIISPARIDPFEGGGKTPDPKQASKLATFVDVMQGIRLEREKTAVVKQIQEKAKAGELQ
TVVTAKAPGKRRRRWDQTGDELPAKKRPEQADTPSAGKWDETPGRTKASDTPGRGAETPG
RTGETPGTARGESDTPGRGGVTPSSRIWEATPNYVPQGAATPTNIGIGTPGHGTSTRRNK
WDETPKVDGTETPGRTPGWAETPRTDRLGAETPGMTPTPRGGKRRSRWDETPQAATPGGS
TPSVITTPGLTPGGMTPGGVTPMLGGPTPIGTQAMHMHTPSPGHLISMTPEQIEAFRWEK
EIDERNRPLTDEELDTMFPFDGYKVLQPPASYQPIRTPARKLTATPTPLAGSSGFRIQTD
DKSAKFVEDQPAGNLPSLKPDDYQYFDKLLVDVDETTLSAEEQRERKIMKLLLKIKNGTP
PMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRP
YVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTA
RAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLKNLVEI
IEHGLIDEQQKVRTITALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKA
IGYLIPLMDAEYAYHYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEPQYIKEE
ILPEFFKQFWTHRMALDRRNYKQLVDTTVEVANKVGSADIIGRVVDDLKDESEQYRKMVL
ETIEKIMANLGAADIDSRLEEQLIDGILYAFQEQTNEDIVMLNGFGTVVNAFGKRTKPYL
PQICGTILWRLNNKSAKVRQQAADLIARISPVMKTCGEEKLMGHLGVVLYEYLGEEYPEV
LGSILGALKAIVNVIGMNKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEH
VSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQLR
VCTTVAIAIVAETCSPFTVLPALINEYRVPELNVQNGVLKSMSFLFEYIGEMGKDYIYAV
TPLLEDALMDRDLVHRQTACAAIKHMAIGVVGFGCEDALAHLLNSVWPNIFETSPHVVNA
FTEAVEGLRVGCGSVKVLQYALQGLFHPARKVRDVYWRIYNSLYISAQDSLVASYPSVPN
DETNHYVRDELHYFL
NT seq 4008 nt   +upstreamnt  +downstreamnt
atggctaccactgaagaaatgatcgagagccacataaaaaagctacaagcagaaagacaa
aatcaaaatggagggcaaaaagagtcttctggggttgcttttggcaaagcagctgagtct
gacctgtatggagatgaaaatgcctatgctgggtatgtgacatcaattgcaccaaatgaa
caagatgaggatgatggtgatcaggcagcaacgctcggcggtggaaaattgccctccttc
actgccccaactaacatttataaagatattcaaaaggagagtgaagatattgatccaatg
gcagcatacaaaaggccaactattgcagacagagaagatgaatacagagcaagaagaaga
cagatgatcatttcacctgcaagaatagatccttttgaaggaggcggcaaaacaccggac
ccgaagcaagctagcaagctggcaaccttcgtcgatgttatgcaaggaatacgtcttgag
agggaaaagacggctgttgtgaaacaaattcaagagaaagcaaaggccggtgagctgcag
acagtggtaacagcaaaggctccaggcaaacgacgtcggagatgggatcaaactggagac
gagctaccagcaaagaaaaggccggaacaagcagatactccatccgctgggaaatgggat
gagactcccggcagaacaaaggcatcagatacccccggtagaggagcagaaacacccggc
agaactggtgaaactccaggaacagcaaggggggaatcagatacccctggaaggggaggt
gtgacacctagttccagaatctgggaagccactccaaattatgtaccacagggtgcagcc
acacccacgaatattggtattggaactcctggacatggcacaagtacaagacgcaacaaa
tgggatgaaaccccgaaggttgatggcacagaaacgccagggagaacaccaggctgggca
gaaacgccaagaaccgaccgtctgggcgccgaaacgcccggtatgacaccgaccccaaga
gggggcaagcggaggtctcgatgggatgaaacaccacaagcagctacgccaggaggcagc
actccaagtgtcattacaacacctggtctcacccctggtggtatgacccctggtggagtc
accccaatgcttggtggaccaaccccaattggaacccaggcgatgcatatgcatacaccc
tcaccaggccatctaatatcgatgacacccgaacaaattgaagccttccgttgggagaaa
gaaatagacgagcggaataggcctttgactgatgaagagttggataccatgtttcctttc
gatggatacaaagttttgcaacccccggcttcttatcaaccaatcagaacgccagccaga
aagctcactgcaacaccaacaccgcttgcaggaagctcgggatttcgtatccagactgat
gataaaagtgccaagtttgtcgaggaccagccagcgggtaatctccccagcttgaaacca
gatgactaccagtatttcgacaaattattggttgatgtagacgagacaaccctttctgcg
gaggagcagcgcgaacgaaagatcatgaagttattgctgaagataaaaaatggcacgcca
ccaatgagaaaggccgctttgaggcaaatcactgacaaagcaagggaatttggagctggt
ccactcttcaatcaaattctacctttgctcatgtcaccgactctcgaggatcaggaacgt
catttattggtgaaagttatcgacagaattttatacaaacttgatgatcttgtgcgtccg
tatgtccacaagattcttgtcgtcattgaaccgttgcttattgacgaagattactacgct
cgcgtagagggacgtgaaatcatctccaatttagcaaaagctgctggcttggcaactatg
atttccactatgagacctgacattgacaatattgatgaatacgtccgtaataccactgca
agagcatttgctgtcgttgcatcagcactgggaataccatccttattgccgttcttaaag
gctgtttgtaagagcaaaaagtcatggcaggcaaggcacactggcatcaaaattgtgcag
cagattgctattctcatggggtgtgctattcttccgcatcttaaaaatcttgttgaaatt
attgagcacggtttgatagacgagcagcaaaaggtgcgaacaatcacagctctcgctatt
gctgctctggctgaagctgcaactccgtatggcatcgagtcattcgacagtgtgctcaag
cccctctggaagggtataaggcagcacagaggaaagggtttggctgcatttctgaaagcc
attggctatttgatcccactcatggacgcagaatacgcttaccattacacgcgggaagtc
atgctcattttgattcgagaatttcagagtcctgacgaagagatgaaaaagattgtgtta
aaggtggtaaaacagtgttgtgcgacagatggtgttgagccccagtatatcaaagaagaa
atcttgccggagtttttcaagcagttctggacccatcgtatggctttggataggcgaaat
tacaaacagctcgttgatacaactgtggaagttgccaacaaggtaggaagcgccgacatc
atcgggcgtgttgtggatgacttaaaggacgaaagcgagcagtacaggaaaatggttttg
gaaacgatagagaagatcatggcgaatttaggagcagcagacatcgattcgcgccttgaa
gaacagcttattgatggaatactttacgctttccaggaacagacaaacgaggacatcgtc
atgttaaatggcttcgggacagtagtaaatgcgtttgggaaacgtactaaaccgtatctg
ccacagatctgtggtacaatcctgtggcgtttgaacaacaaatcagcgaaagttcgtcaa
caggctgcagatttgattgcaagaatttcccccgtcatgaaaacgtgtggagaggaaaag
ttaatggggcatcttggagtggtattatacgagtacctcggtgaagagtacccagaagtt
cttggcagtatcctcggagctttgaaggcaatcgtaaatgtcattggaatgaacaagatg
acccctccaatcaaggatcttcttcccagactgacgcctattttgaaaaacagacacgaa
aaggtgcaggagaactgcattgatctcgtcggccgcattgcagatcggggtgctgaacac
gtcagtgcaagagaatggatgagaatctgctttgagctgcttgagctcttgaaagctcac
aagaaagccattcgacgtgctacagtaaacacatttggatacattgcaaaggctattggt
ccccaagatgtccttgccactctgctcaacaacttgaaggtgcaggaacgtcagctccgc
gtttgtacaaccgtagccattgctatcgtcgcagagacttgctctccgttcaccgtctta
ccagccttgataaacgagtacagagtccccgagcttaatgtacaaaatggcgtgctgaaa
tccatgtctttccttttcgaatacatcggtgagatgggcaaagactacatttatgctgtg
acgccgttgctggaagacgccctaatggaccgagatttagttcacagacagacagcatgc
gctgcaatcaagcacatggccattggtgtcgttgggtttggctgtgaagatgcattagct
catttgctgaacagtgtgtggcctaatatattcgaaacctctccacatgttgtcaatgca
ttcactgaggcagttgaaggacttagagttggctgcggttcagtgaaagttttacaatat
gcactccagggccttttccacccggctaggaaagtccgagatgtctattggaggatatac
aattcactttatatttctgctcaggattcccttgtggcgtcatatccatcagtgccgaat
gacgagaccaatcattacgtcagagatgaactgcattacttcttatag

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