Rhopilema esculentum: 135682227
Help
Entry
135682227 CDS
T09994
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
res
Rhopilema esculentum
Pathway
res04140
Autophagy - animal
res04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
res00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135682227
04148 Efferocytosis
135682227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
res04131
]
135682227
Membrane trafficking [BR:
res04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
135682227
Hops complex
135682227
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
TPR_IF140-IFT172
DUF5563
Motif
Other DBs
NCBI-GeneID:
135682227
NCBI-ProteinID:
XP_065053091
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MADTTNWNPLGEVYYRTVEVYDMLWQDKINLSRYKVAAGTFGGPIAITKDDVSAGSQTVY
IFSASGKQMATFNADGGRLVKIGFAVNEDLICVSENGHAYIYDLFGNFQRQFSLGMEVQK
SRIIDCSIFASYFGTGICVISGDYEFYVVNNIDDVKIKRLQSPFVEAPPSSWVVLSPPEE
QGAKVLMAKDNSLYELDVVQAKPKSLASHHEVSSYTEMAVSFNQKYIAVLADTGLLWIGS
SNLKDEYCVYDTHLQMRPKQLVWCGSGAVVGYWESYLLMVGPTRDTVKFYLDSNSCLVQE
VDGLRIIGNEKHQFLQKVPAEVEDVFKLGSVKPGAMLYDANIEYENMRVRVDDYMRTIKN
HLQEAVHACIKAAGQEFEPKAQRGLMKAASFGKSFLKDMRPQAFVEMSQTLRVLNNVRHY
KIGIPLTFEELQRLTLPVLIDRLILRRHYLLAIRICDYLRIPKREGASRILAHWACQKVK
QVGVDDEQLAREIAAKLGDTPGISYTEIASNALEQGRTALAVKLLEYEPKASNQVPLLLR
MANYDMALQKAVDSYDSEQVYLAMEHIRAGDKHGDFLMKIRNYPLAFSLFIKRCKQVERE
TLVNLYLQEDQFRNSGNMYVQDSFSETTLGSRIKQLGIARESFDNRGQQVFPFGVQVTTE
QIKLLEFQKRLGDEFGEKYLSLCMYDTLHKLICCGHQKHAETMRKDFNIPDTRFWWKKIQ
ALGEVRNWQELEKFSKSKKSPIGYEPFVDVCLSNGPALNEAAKYIQKVPIDKRVKIYMKM
GYMDQAAETAFQTKSIDDLNSIQYKCSGNRELTEKIQMYKSQLSYKR
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacaacaaactggaaccctcttggtgaggtgtactacagaactgtggaagtt
tatgatatgctttggcaagacaagataaacctttcacggtataaagttgctgctggtaca
tttggaggtcctatagcaatcacaaaagatgatgtttcagctggaagtcaaacagtgtac
atattttcagcatcaggaaaacagatggcaacttttaatgctgatggtggtagacttgta
aagattggctttgctgtcaatgaagatctcatttgtgtgtcggaaaatggtcatgcctac
atatatgatctctttggcaatttccaaaggcagttttcacttggaatggaggtacagaag
tcaagaattattgactgctcgatttttgccagttacttcggaactggaatttgtgtcatt
tctggagactacgagttttacgtcgtcaataatatagatgatgtcaagattaaaaggctt
cagtctccctttgttgaagctccaccaagtagctgggttgtactgtcacctcctgaagaa
caaggggccaaagttttaatggccaaggacaacagcctctatgagctagatgtagttcaa
gccaagccaaagagtcttgcaagtcaccatgaagtttcatcatatactgagatggcagtt
tcattcaatcaaaagtacatcgccgtacttgctgatactggcttgctttggataggctct
tcgaatctaaaggacgagtactgtgtatacgacacacacttgcaaatgcgaccaaagcag
cttgtttggtgtggatcaggagcagtggttgggtactgggaaagctatttgcttatggtt
gggcctacgagagatacagtcaaattttatctggattcaaactcatgtttggtgcaagag
gttgatggattaagaattattggaaacgaaaaacaccagtttcttcagaaagtgccagcc
gaagtcgaagatgtgttcaagcttggctcagtgaagcctggagcaatgttatacgatgca
aacatcgaatacgagaatatgcgagtgagagtcgatgactacatgaggacaatcaagaac
catctgcaggaggctgtgcatgcctgtatcaaggctgcggggcaggagtttgaacccaag
gcacagagaggactcatgaaggctgcgtcatttggtaaaagttttcttaaagacatgaga
ccccaagcattcgtcgaaatgtcacagacattaagggtcctcaataatgtgagacactat
aaaattggcatcccattgacattcgaagaacttcaacgacttacactaccagttttgatt
gacaggcttattctaaggcgtcactacctattagcaatacgaatatgcgattacttacgg
ataccaaagagagaaggggccagcagaatcctcgcacattgggcttgtcagaaagtgaag
caggtaggcgtcgatgatgaacagctagcaagagaaatagctgcgaaactgggcgacact
cctggtatttcctacacagagattgcctcaaatgctttagaacaaggaagaacggccttg
gctgtcaagctgttagaatatgaaccaaaggcgtcgaaccaggtaccccttcttctccga
atggcgaattatgacatggcactgcagaaggctgtcgacagttacgattccgaacaagtg
tacctagcaatggagcacattagagcaggcgacaaacatggcgatttcctaatgaaaata
aggaactacccattggctttcagtctgtttatcaagagatgcaagcaggttgagcgcgag
acacttgtgaatctctacttacaagaagaccagttcagaaacagcggcaatatgtatgtt
caagacagtttttctgaaaccacgttgggttcgagaataaagcaacttggaattgctaga
gagtcatttgataacagaggacagcaggttttcccttttggtgttcaggtgactacagaa
cagataaaacttttggaattccaaaagaggcttggggatgaatttggggagaaatacctc
agtctgtgcatgtacgacacgttgcacaagctaatttgttgtggacatcaaaagcacgct
gaaacaatgcgaaaagatttcaatattcctgataccagattctggtggaagaagatccaa
gctcttggagaagttcgaaactggcaagaattagaaaagttctcgaagagtaaaaagtca
ccaattggctacgagccgtttgttgacgtgtgtctttccaacggtccagcattgaatgaa
gctgcaaagtatatccagaaagtgccaattgacaagagagtgaagatttacatgaaaatg
ggttatatggatcaggcagctgaaacagcctttcaaacaaagagtatagatgacctgaat
tccatccaatacaaatgttccggaaatagagaactgaccgagaagattcaaatgtataag
tcgcagttgtcatataaaaggtag
DBGET
integrated database retrieval system
