Rhopilema esculentum: 135682679
Help
Entry
135682679 CDS
T09994
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
res
Rhopilema esculentum
Pathway
res03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135682679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
res03019
]
135682679
Messenger RNA biogenesis [BR:
res03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135682679
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
135682679
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
135682679
NCBI-ProteinID:
XP_065053779
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MSVGGGFGDNILGMNQFQGSYRKQPQDLSPGGRKPNLGSGFGHGKQGYKMGMYKDENETE
EDFNNPLLSKPGFPQRPSDRDISQQMSQLSLYGSQSDPRVGTWNGSGQTFDDPRSAAWNG
GQSLDDVSADLWRSTSQPGGVLPMYSSGQMTQTSRGQISTTQFSRSFSTPPIASGSDRFG
GLSGTGMPPISTGFHHSSSSTSGQTSPGSRNGLLSMGGRSTIGQQLPSSLASNSQSQSAI
NNSIQKTGRTAGLPSVLSSGSRSSPNLLPLGLTQPVHQQQVSQIQTSNQQPNRVGSFGSL
SSLSGGGPLSGIGTRPFSSSGSQGGLLGQLQNVSAGHAVSSLQSTMASVFSGSSDNLTQP
IGSGISNFDVDFPALANRGASSSSSPSSSQSASLPSRTGYGGALQNHDLESFVMVTNKSQ
DSVSEFQIQNEDFPALPGSSQSDSSLHQENKSLVYQELLMSSGSSYESVVKDGRPFSDKK
SRTPGSAGIQTSSSGVITNIPVGMVTDQFGMIGLLTFIRAAETEPNLVTLALGSDLTTLG
LNLNSTESLYHTFGSPFSDTTCRPHEIDFYVPPEYLVNTTIRDRLANIRLNRYGEDLLFY
LYYTNCGDILQLAAAAELYSRDWRYHKEERVWITRAPGMDPQVKTSSYERGMYYCFDYHS
WRKVPKEFHVDYDKLEEKPTLGSVA
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttggtggaggttttggagataatattttagggatgaaccagtttcaaggctcc
tataggaaacaaccgcaagatttatcaccaggtggacgaaaaccaaatcttggcagtgga
ttcggacatggaaaacaaggttacaaaatgggaatgtataaagacgaaaatgaaactgaa
gaagatttcaacaacccattgcttagcaaaccaggatttccgcaaagaccctcagacaga
gatatcagtcaacaaatgtcacagttaagtttatatggatcccagtcagatccgagagtt
ggcacttggaatggttcaggacaaacctttgatgatccacggtcggctgcatggaatggt
ggacagtcgttagatgacgtttcagccgatttatggaggtcgactagtcagccaggagga
gttttaccaatgtacagttcaggacaaatgacacaaacatcaagagggcagattagtaca
acacagttctcgcggagtttttctacgccgccgattgcatctggaagtgacaggtttggc
ggtttatctggtacaggaatgccgcctatttctactggatttcaccacagttcatcttct
acatctggtcagacgtctcctggcagcaggaatggtttgctatcaatgggtggacgatca
acaattggacagcagttaccgtcaagtcttgcgtctaattcacagagccaatcagcaata
aataactcaatacaaaagacaggaagaactgcaggattaccctctgttttaagcagtggc
tctcgaagttcaccaaatttattacctcttggactgacccagcctgtacatcagcaacaa
gtttcacaaatacaaacatcaaatcaacaaccgaacagagttggaagttttggaagctta
agcagcttgtccggaggcggaccgttgtcaggaatcggaacaagacctttctcatcatct
ggtagccagggtggtttacttggccagttacaaaatgtatcggcagggcacgcggtatca
tctttacaatcaacaatggcatcagttttctcagggtcatcagacaatcttacacagcca
atcggttcaggaatcagtaattttgacgtagactttcctgcactggcaaacagaggagct
tcatcatcatcgtcaccctcaagttcacaaagtgcgtcactgccttcaagaacgggctac
ggtggtgctcttcaaaatcatgatttagaatcatttgtcatggtaacaaacaaaagtcaa
gactcagttagtgagtttcaaattcaaaatgaagactttccagctctcccgggatcttcg
cagtcagattcttcattacatcaagaaaacaaatcactggtgtaccaggagttactaatg
agctcaggatcttcttacgaaagtgtggtaaaagacggcaggccttttagtgataaaaag
tcaagaactccaggctctgctgggatacaaacgagctcatctggtgttattaccaatatt
cccgtcggaatggttactgatcagtttggtatgattggactgttaacgttcatccgagca
gcagaaacggaaccgaatttggtcactttggcccttggaagcgatttaacgacccttgga
ctgaatttaaactcaacagaaagcctgtatcatacttttggatcacccttctcagacacc
acgtgtcgaccgcatgaaattgatttctacgtgcctccagaatacttagtaaacactaca
atccgagatcgactggcgaatatacgactaaatcgatacggcgaggatttgctgttctat
ttgtattatacgaactgtggtgatattctacaactagccgctgcagcagaactatattct
agagactggaggtatcacaaggaggagagagtttggatcacaagagcccctggtatggat
ccacaagtgaaaacaagttcatatgaacgcggaatgtattactgctttgactatcatagt
tggcggaaagttccgaaggaatttcatgtagactatgacaaactcgaagagaaaccaaca
ttaggaagtgtagcctga
DBGET
integrated database retrieval system
