Rhopilema esculentum: 135682736
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Entry
135682736 CDS
T09994
Name
(RefSeq) ATP-dependent RNA helicase DDX42-like
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
res
Rhopilema esculentum
Pathway
res03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135682736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
res03041
]
135682736
Enzymes [BR:
res01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135682736
Spliceosome [BR:
res03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
135682736
Complex B
135682736
Complex C
U2 SnRNP specific factors
135682736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
MscL
Motif
Other DBs
NCBI-GeneID:
135682736
NCBI-ProteinID:
XP_065053817
LinkDB
All DBs
Position
Unknown
AA seq
778 aa
AA seq
DB search
MFPSGPQKPKGLGFSGFAMQTKKPKEKVLPQLGNKLVASSQSRSDLFKPEQSKESEMYNP
FEPTTEPIQAHKKQDKKPKKKRKSRWDTDDVPYQRSANSPPPYQRTSDDEDEDELDKFMA
GIENDLEKEEIEAKKQEEQEKDAGKSKGKRTDIDDEDDQESYFNAVKDGLIVPYPDDEDL
WDYDSDGNPIPPEKSKMIEPLPPIDHSEIDYKNFDRNFYEEHSEIAALSRSDVEALRKKL
GIKVLGAEPAKPAISFAHFGFDLFLMSSIRRSEYSQPTPIQAQAVPVALSGRDIIGIAKT
GSGKTAAFIWPMLVHIMAQNELKDGDGPIGLICAPTRELCQQIHAEVKKFGKCYNLRSVA
VYGGGNKWEQSKALQQGAEIVVATPGRLIDLIKAKATNFQRVTYLVFDEADRMFDMGFEP
QVRSIANHVRPDRQCLLFSATMKKKIERLCRDILTDPIRIVIGEIGEANEDILQVVEVFQ
AQVQKWEWLLSHIVEFCSGGSVLIFVTKKTNSEELAKNLREKGHELGLIHGDFDQYERNR
VLSEFKKGDYPILVATDVAARGLDITSIKTVVNYDVARDITTHTHRIGRTGRAGEKGIAY
TLITPADQNFSGDLVRNLEGANQRVPEELMDLAMKNAWFRKARARQKSKSSSNKEFRPRD
RPGLGHTGIQDALAQIDNTPLDEDEDLSEGGFGSSTRKTTKSLLTSYAAASSMGSSRLSN
IKSAFSTGYSRFTKASSSGANTMDVGSHNSNVESQMPKAMSTFQAPEPPKTKKTKWSR
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgtttccttctggacctcaaaagcccaagggcctgggattttcaggattcgcaatgcaa
accaagaagcctaaggaaaaagttctcccacaattgggtaacaaactcgtcgctagttcg
cagtctagaagcgaccttttcaagccagagcagagcaaagaatcggagatgtacaacccg
ttcgaaccaacaaccgaaccaatacaagcacacaaaaagcaagataaaaagccgaaaaag
aaaagaaagtcgagatgggatactgacgatgtcccataccaaaggtcagcaaacagccct
cctccatatcaaagaacaagtgatgatgaagatgaggatgaacttgacaaatttatggct
ggcattgagaatgatctagaaaaagaggaaatcgaagcaaagaaacaagaggagcaagaa
aaagatgctggtaaaagcaagggaaaaagaactgatattgatgatgaagatgatcaagag
tcttattttaatgctgtcaaagatggcctcattgtcccatatccagatgatgaggatctg
tgggattatgacagtgatggaaatccaataccaccagaaaagtcaaagatgattgaacca
ttgccgcccattgatcactcagagattgattataaaaattttgatagaaatttttatgag
gaacacagtgaaatagctgcattatcaaggagtgatgtagaagcattaagaaagaaactt
ggcataaaggttttgggtgctgaacctgcaaaacctgcgattagctttgcacattttgga
tttgatctcttcttgatgtcttcaatcagaaggtcagagtactcacaaccaactcccatt
caggcacaggctgtcccagttgccttaagtggcagagacattatagggattgccaaaact
ggcagcggaaaaactgcagccttcatctggcccatgttagttcacataatggcacagaat
gaactcaaagacggcgatggtcccattgggcttatttgtgcacccacaagggaattgtgc
caacaaattcatgccgaagtcaaaaagtttggaaaatgctacaatttgcggagtgttgct
gtgtatggtggaggcaataaatgggagcagtcaaaagctttgcagcaaggagctgaaatt
gttgtcgctactcctggacgattaatcgacttgatcaaagccaaagctacgaattttcaa
agagtcacgtacctggtctttgacgaagcagatagaatgtttgacatgggatttgaacct
caagtgcgatcaatagccaaccatgttcgtcctgacagacaatgtcttttgttcagtgca
acgatgaaaaagaaaatagagcggctatgtagggatattctcaccgaccctattcgcata
gtgattggagaaattggcgaggcaaacgaagacatcctgcaagtagtcgaggtctttcaa
gcacaggtgcaaaaatgggaatggctgttgagtcatattgtagaattttgctcaggtgga
agcgtcctgatatttgtgacgaaaaaaaccaacagcgaagaacttgcgaagaacctgcgg
gaaaaggggcatgagcttggtttgattcatggtgacttcgatcagtatgaaaggaatcga
gtgttgagtgagtttaaaaaaggcgattacccaattcttgttgcaacagatgttgctgct
cgtgggttggatatcacttcgataaaaactgtggtaaactatgatgtcgctcgcgatatc
acaacacacactcatcgaatagggagaactggccgtgctggagagaaaggcatcgcatac
actcttatcactcccgctgatcaaaacttctcgggtgatctggttcggaatttggaagga
gccaatcaaagggttccggaagagctgatggacttagctatgaagaatgcatggtttaga
aaagcaagagcgaggcaaaaaagcaagagctcttcaaacaaagaattccggcctcgagat
cgtcctggcctcggacacactggtatccaggatgcattagcacagatagataacacaccg
ttagatgaagatgaagacctttctgagggaggctttggatcatcgacacgaaaaacaaca
aaatctttgctgacttcgtacgctgcagcttcttcgatgggttctagtcgactcagcaac
atcaaatcagccttttcgactggatatagtcgctttacgaaggcttcaagcagcggggcc
aacacaatggatgttgggtcgcataacagcaatgttgagtcgcaaatgccgaaagcaatg
tcgacgtttcaagcaccggagccaccaaaaacgaagaagaccaaatggagtagatga
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