Rhopilema esculentum: 135682747
Help
Entry
135682747 CDS
T09994
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
res
Rhopilema esculentum
Pathway
res03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135682747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
res03019
]
135682747
Enzymes [BR:
res01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
135682747
Messenger RNA biogenesis [BR:
res03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
135682747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_18
CbiA
ATP_bind_1
nSTAND3
AAA_22
MMR_HSR1
AAA_24
AAA_10
GTP_EFTU
Motif
Other DBs
NCBI-GeneID:
135682747
NCBI-ProteinID:
XP_065053836
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MRLHGLSRYTLVWPFLRKRTFKLFRHLALSHKDMDATDATSTEKKEWVLEQDNELRFEVE
LQHQAELVLTHGQAEIFGTELVKNKVYSFRSGDKVAVFTWHGCTIELQGKLEAAYVASET
PMVIYLNLHVAMEQLRQKAEKSIPPTIGPKVMVCGPMDVGKSTLCRLLLNYAVRMGRRPI
YVDLDLGQGSIAIPGTIGALLVERPADVEEGFSLQTPLVYHHGINNPMANLKLYSCLVEE
VSKNVHKRFEEKEKARVSGCIVNTCGWVTGEGFRLLLDIAKSFDVNAVLVIDQEKIYNQL
KSRLPDAVQVLHLPKSGGVVERSKDVRRQKRDEKVREYFYGGRTPLYPHVFDVNFADIKI
YKIGAPSVPDSCLPLGMEPEINELKTVLVHPSRDLLHCVCSVSTAISEQDAVTSNVAGFI
VITNVDMENQTFTILSPAPRPLPYKILLLSTIKFMDLK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcatggcctaagcagatacacgcttgtttggccatttctacgaaagaggacc
ttcaagttattcaggcatctggcactgtcacataaagatatggatgctacggatgcaact
tcaactgaaaagaaagagtgggtactagaacaagacaatgagctacggtttgaagttgag
ctacaacaccaggcagagctagtactaacacatggccaagcagaaatttttgggacagag
ctggtaaaaaacaaagtgtactcattcaggtctggagacaaagttgctgtttttacatgg
catggatgtacaatagagctccaaggaaagctagaagcagcatacgtggcatctgagaca
ccaatggtaatttacttgaatcttcatgttgccatggaacagctgagacagaaagcagag
aaaagcattccaccaacaataggaccaaaggtgatggtttgtggaccgatggacgtaggg
aaatcaactctctgtcgactgttacttaactacgcagttcggatgggaaggcggcctatc
tatgtagatttggacctcgggcagggctcaatagcaataccaggaacgataggtgccctt
ctggtagaacgacctgcagatgttgaagaaggcttctcattacaaactccactagtttat
caccatggtatcaacaatccaatggcaaatcttaaactttattcttgccttgtggaagag
gtttccaagaacgtccataaacgattcgaagagaaagagaaagctcgtgtgagtggctgc
attgttaatacttgtggatgggtgactggagaagggttcaggctgcttttagatatagcg
aaatcatttgacgttaatgctgttttggtgattgaccaagagaaaatttacaaccagttg
aaatcaagactgccagatgcagttcaagttctgcatttaccaaaatcaggaggggtcgtt
gaaagaagtaaggacgtacgaagacaaaaaagagatgaaaaagtgcgagaatacttttat
ggcggcagaacaccgttgtaccctcatgttttcgatgttaattttgcagatatcaaaatt
tataaaattggagcaccatctgtgccagattcctgtttgcctcttggtatggaaccagag
attaacgagcttaaaacagtccttgtccatccaagtcgtgatttgcttcactgtgtttgc
tctgtcagcactgccatttctgaacaagatgctgttacctcaaatgttgcaggcttcatc
gtaataacaaatgttgatatggaaaatcagacctttaccatattatctccagcaccaaga
ccgctgccttacaaaattcttctgctaagtactattaaatttatggatttaaagtaa
DBGET
integrated database retrieval system
