Rhopilema esculentum: 135683109
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Entry
135683109 CDS
T09994
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
res
Rhopilema esculentum
Brite
KEGG Orthology (KO) [BR:
res00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
res03009
]
135683109
Enzymes [BR:
res01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135683109
Ribosome biogenesis [BR:
res03009
]
Eukaryotic type
Pre-60S particles
Helicases
135683109
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
SBF_like
Cas3-like_C_2
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
135683109
NCBI-ProteinID:
XP_065054344
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MAVQQRDKEWISFDPELSEVILDALRISNFLHPTPVQETCIPLFMSNKDVVAEAVTGSGK
TLAFVIPIIEILMKREEMLKKHQIGAVIITPTRELAIQIDKVLQLLLKNISLSHHVFVGG
TDPSADVERFKTEGAHIVVATPGRLVDLLQRRQDTIDFRSCLKFVDILVLDEADRLLDMG
FKTSINTILSYLPKQRRTGLFSATQTRETEDLVRAGLRNPVKVVVKDQDLTSNESRTPSS
LQNFYMICEIQEKFSQLVAFLKQHKDEKHIVFFNTCACVEYFSRVLKLILKKADLMSLHG
KMKGKRGKIFDLFQQKSKGILVCTDVMARGVDIPEVHWVIQFDPPSSASAFVHRCGRTAR
IGNIGKALVFLNPAEESFIEFIKINQKAPLEEFEKIDDAQNVSSKLRKFASKDRDLYEKG
IRAFVSFVQAYKKHECSLIFQFKELDIGQLANGFGLLHLPKMPEIKRGVIDGFQNTDVDI
NSIPYIDKTREKQRRLKLNEKEEKKDMNDKDFKHKDKSWSREREKKVKKQLRKEKKENLK
RKRGFAGHKFDDDDVDELNREVGLMKKLKKGKITKEEFDIAINDVVDDDLT
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcagcaacgtgataaagaatggatttcattcgatccagagttgtctgaagtc
atcctcgatgccttaaggatcagtaatttcttgcatccaacacctgttcaggaaacttgt
attccattgtttatgtccaacaaagatgtagtggctgaagctgttactggatcaggaaag
acactagcatttgtaattccaattatagagattctaatgaaaagggaagagatgctcaag
aaacatcagataggtgctgtcatcatcaccccaacacgtgaacttgcaattcagattgat
aaagttttgcagcttttgctcaaaaacatatctttgagccatcatgtattcgttggagga
acagatcctagtgcagatgttgaaagattcaaaactgaaggagcacacattgttgttgcc
acccctggtagacttgtggacttgctgcagcggaggcaagatacgattgattttcggtca
tgtctcaaattcgttgatattcttgtccttgatgaagctgataggctgcttgatatgggt
tttaaaaccagcatcaacacaatactgagttaccttccaaaacaaagaagaacgggcttg
ttttctgcaacacaaacaagggaaaccgaagatcttgtaagggctggattgagaaaccca
gtcaaagtggttgtcaaggatcaagatttaacttcgaatgaaagccgtacgccaagctct
cttcaaaacttttacatgatttgtgaaatccaagagaaatttagtcagttggtagccttt
ttgaaacaacacaaggacgaaaagcacatcgtctttttcaatacctgtgcctgtgttgaa
tatttctcaagggttctcaaattaatactgaaaaaggcagatcttatgtcgctccatggg
aagatgaaaggaaaacgtggcaaaatcttcgatctttttcagcagaaaagcaagggcatt
ctggtatgcactgacgttatggcaagaggtgttgatatcccagaagtccattgggtcatc
cagtttgaccctcccagcagtgctagtgcttttgttcatcgttgtggaagaacagcaaga
ataggaaatattggaaaagcattggtttttctaaacccagccgaagagtcgtttatagag
ttcataaaaattaaccaaaaggcacctcttgaagaatttgaaaaaattgatgatgcacaa
aatgtttcttcgaaactgagaaaatttgcttcaaaagacagagatttatatgaaaagggg
atacgagcatttgtttcattcgttcaagcttacaagaaacatgaatgtagtcttatattt
caattcaaagaactggatatcggacaacttgcaaatgggttcggattacttcatctgcca
aagatgccagaaattaagagaggcgttattgacggttttcaaaatacagatgttgatata
aactcgataccatacattgataaaacaagagaaaaacaaagacggcttaagttaaatgaa
aaagaggagaaaaaagacatgaatgataaagatttcaagcacaaagacaagtcatggtcc
agagagagggagaagaaggtaaaaaagcaactccgcaaagagaagaaggaaaatctaaaa
cgtaaaagggggtttgctggacataaatttgatgatgacgatgttgatgagctcaacagg
gaagtaggcttaatgaagaagctaaaaaaggggaaaattacaaaagaggaatttgacata
gctattaatgatgttgttgacgatgatttgacatga
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