Rhopilema esculentum: 135683500
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Entry
135683500 CDS
T09994
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
res
Rhopilema esculentum
Pathway
res03030
DNA replication
res03410
Base excision repair
res03420
Nucleotide excision repair
res03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135683500
03410 Base excision repair
135683500
03420 Nucleotide excision repair
135683500
03430 Mismatch repair
135683500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
res03032
]
135683500
03036 Chromosome and associated proteins [BR:
res03036
]
135683500
03400 DNA repair and recombination proteins [BR:
res03400
]
135683500
DNA replication proteins [BR:
res03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
135683500
DNA Replication Termination Factors
ELG1-RFC complex
135683500
Chromosome and associated proteins [BR:
res03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
135683500
DNA repair and recombination proteins [BR:
res03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
135683500
Check point factors
HRAD17(Rad24)-RFC complex
135683500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
nSTAND_NTPase5
AAA_lid_RFC1
AAA_16
AAA_22
AAA_14
Rad17
RCF1-5-like_lid
AAA_11
Viral_helicase1
nSTAND3
AAA_19
Mg_chelatase
AAA_5
AAA_18
MipZ
AAA_24
RuvB_N
AAA_23
AAA_assoc_2
ABC_tran
SLFN-g3_helicase
AAA_30
DNAX_ATPase_lid
AAA_28
Gp44_lid
AAA_25
DUF815
MeaB
ATPase_2
RNA_helicase
IstB_IS21
NTPase_1
MCM
bpMoxR
FtsK_SpoIIIE
AAA_7
CbiA
AAA_3
Motif
Other DBs
NCBI-GeneID:
135683500
NCBI-ProteinID:
XP_065054834
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MATDAMDVDVDPAQKTETTTKKPANAGKSYELPWVEKYRPVKLTEIVGNEETISRLQAFA
ENGNVPNVIIAGPPGTGKTTSILCLARALLGTSYKDAVLELNASNDRGIDVVRNKIKMFA
QQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNQSDKIIEAIQSR
CAVLRYSKLSDAQILERLLDVCEKESVPRNDAGMEAIVFTAQGDMRQALNNLQSTYAGFG
FVNSENVFKVCDEPHPLLVKDMLAHCTNGDIDEAYKIMSHLWRMGYSAVDIITNIFRVCK
NMEMAEYLKLEFIKEIGYTHMRVAEGVNSLLQMSGLLARLCSKTVQ
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggatgctatggatgtcgacgttgatcctgcacagaaaactgaaacgacaaca
aaaaaaccagcaaatgcagggaaatcatacgaacttccttgggttgaaaagtatcgcccg
gtaaaattgactgaaatagtgggcaacgaagaaacgataagccgtcttcaggcctttgca
gaaaatggcaacgttcctaatgttatcattgcaggaccaccagggactggaaagacgact
agcattctctgcttagcccgagcattgcttggtacatcatataaagatgctgtcttggaa
ctgaacgcttcaaatgatagagggattgatgtggtacgaaataaaataaagatgttcgca
caacagaaagtgacactgccaaaaggaagacacaagatcattattttagatgaggctgat
agcatgactgacggtgcacaacaagccttgagaaggacaatggagatctactcaaagacg
acaagatttgcactggcatgcaaccagtcagacaaaattattgaggccatacaatcacgc
tgtgctgtcctccgatactcaaaattaagcgatgctcaaatccttgagagattactcgat
gtgtgcgaaaaagaaagtgtacctagaaatgatgctgggatggaggctatcgtttttacg
gcccagggggatatgcgacaggcgttgaacaatttacagtcaacgtatgctggctttggc
tttgtgaatagtgaaaatgttttcaaggtttgtgacgagcctcatcctttgctagtcaaa
gatatgctggcgcattgcacgaacggagatatcgacgaagcatacaagattatgtcccat
ctctggcgcatgggatattcagcagttgacataatcaccaacatcttcagagtgtgcaaa
aatatggaaatggcggaatatttgaaattagaatttataaaagaaattggttatacacat
atgagggttgcagaaggggtgaattctcttttgcagatgtcaggacttcttgcaaggctt
tgcagcaaaacagtccagtga
DBGET
integrated database retrieval system
