Rhopilema esculentum: 135683976
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Entry
135683976 CDS
T09994
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
res
Rhopilema esculentum
Brite
KEGG Orthology (KO) [BR:
res00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
res03021
]
135683976
03036 Chromosome and associated proteins [BR:
res03036
]
135683976
Transcription machinery [BR:
res03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
135683976
Chromosome and associated proteins [BR:
res03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
135683976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
S1
Spt6_S1
SPT6_acidic
Tex_YqgF
HHH_9
HHH_3
S1_RRP5
Spore_coat_CotO
Tex_N
Spectrin_SYNE1
OB_RRP5_4th
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
135683976
NCBI-ProteinID:
XP_065055471
LinkDB
All DBs
Position
Unknown
AA seq
1688 aa
AA seq
DB search
MSDFLEHEAEESDEELEANSDEEDLGPSEKKKKRKKIEDEEEDDEEDEIDEELINDIIND
DDEEVEESDQEPRRKKRPRRESEDEVDDEDLALIEENTGIKLKKKKHSRVKLLDSDEEDE
PDETKEREEIENELFKDDEELNGRSSDENGRSSDENGRSSDEREDESAAGNQGSSQAYAP
IEDLTDEEDDDGDYGFIVDDDDQPIHTRPAKKKRSKDKYISSALQEAQDIFGLEFDLNEL
DQYDDGLDQASEEDYEENEDEVQTVKKRKKKKTSRKSIYDVYEPSELEKSHLTDKDNEVR
VRDIPERFQLRAVPVKLATDIELDDEAEWIYKQAFMQTPISQQNFPESRDFERRHPAPQL
KPVSTIPKIRSALNFMKKELFEVPFIATYRKEYIEPELKVDDLWTIFDFDAKWTQLNGRK
QNMKKLFEQMQKYQFELVLKNEDKKVDEHFRTLEQEDIDALDNVQGMEELMDVYMQFQLY
YSDDIPKMQAWFKDKERAAKKSKSKVKEKTKKKESSDGVGEGEDREGEDDNTKDGLDEST
EKEGDEAEEDEATKEDEDANEDVEETRKIPRRRDFYTICKDNGLLNLTKKFGLSPLQFAE
NLRDNYQRHEPEQVPEEPEELAEQYICNGFQTAAAVLEGARHMLAVQIARTPLVRQSVRQ
AFFDRAKVSLIPTKKGKKEIDDFHQYAAFKYIKHKPVRDLQGEQFLKMCQAEKEGLVEVK
VGIDLDAELGYTTYLEEIKMLFYRDEYSRVVQEWNKHRTKVLVKALEQILYPAFANELKS
KLLRESTDYVIQLCARKLKSLIAVAPYQGDSHVRQESDFGGRTETEHGCRVLACGFMPDQ
NVAAFIAMLDGDGEVIDFLRLKHLLKRRNVGRQADREAKEREFETVKKFILNHRPHVVAV
TAQCREAQNVVEDIRSCIVDLEQEQQMAPIYVELVDGEVAKIYEASPRSTTEFKDYPPLL
RHAVSIGRRLQDPLIEFAGLCDGEGELECLILHPLQELLPKEQLAKALEVEFINRTNVVG
VDVNRAIEHPHVAALIQFICGLGPRKGGDLIKKLKTQTTRLENRSQLVLTYGMGPQVFLN
CAGFIKIDTSSIGDNMEVLDSTRIHPETYDWARKMAVDALEYDDGMEEAQPSAAVEEILE
QPDRLKDLDLDAFADELARQGYGNKQITLYDIRDELINRFKDHRVPYRQLDPDEKFKLLT
GETEETLFVGKMVTCIVTGFAYRKPSREALDQANPVRNDDTNLWQCPFCLKDNFPDLSEV
WTHFDNGSCAGEAVGVRVRLDNGISGFISNRNISDKGVKRPEDRVQHGMTLHARVLKLNM
ERFQVDLSCKSSDLADKEKKFSPPKDLYYDHDAADKDKKVEEDAKKALMKRTAYIKRVIS
HPAFKNFTFRDAEKFLEDLEQGECVFRPSSKGSDHLTVTWKVHTAIYQHVDIREEGKENV
FSLGKSLWIENEEYEDLDEIIARYIQPMSSQAREIINHRYYRETEGGVKQKLEEILVTEK
RKNPSRIPYFFSASQTYPGKFMLGYMPRNKPRVEYVTVCPEGFRYRGRVHGNTNALLRWF
KEHFRDPIPGLTPKLTRTPGGGSTNATPYTPGGTPHSILTDIDMSRLTPLSMQGYSRGTP
AHSANPAVAILQQDQARSSPGQNYGNQQWNSYRQNQQFPDQYNRYGNYSSRQNTPQQQQQ
QDQQQYVR
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttcttggaacatgaagccgaggaatcggacgaagagttggaagcaaattcc
gacgaggaggatttaggcccatctgaaaagaaaaagaagagaaagaaaattgaagatgaa
gaagaggatgacgaggaagatgagattgatgaagaattgataaatgatataatcaatgat
gacgatgaagaagtcgaagaaagtgaccaagaaccccggcggaaaaaacggcctagaaga
gagagtgaagacgaagtagatgatgaggatcttgcattgattgaagaaaacactggtatt
aagttaaaaaagaaaaaacattctagagtcaaactgttagattctgatgaagaagatgag
ccagatgaaaccaaggaaagggaggaaatagagaatgagttgttcaaagatgatgaagaa
ttgaatggaagatctagtgatgagaatggaagatctagtgacgagaatggaagatctagt
gatgagagggaagacgaatcagctgctggaaatcaaggaagtagccaagcatatgcacca
attgaggatttaactgatgaagaggatgacgatggagactatggattcattgttgatgat
gatgatcagccaattcacacgagacctgcaaagaagaaacgaagcaaggacaaatacata
agcagtgcattgcaagaagcccaagatatttttggcctagagtttgacttgaatgagtta
gatcaatatgatgatggtcttgatcaagcatccgaagaagactacgaagaaaatgaagat
gaagtacagactgtgaaaaagagaaagaagaagaagacttcaaggaaatccatttatgat
gtctacgagccttctgaactagagaaaagccatttaactgataaagataacgaggtgaga
gtgcgcgacattcctgagagattccagctccgtgcagtgccggtgaagctggccactgat
atagagcttgatgacgaagctgaatggatctacaagcaagcgtttatgcagacgcccata
tcgcaacagaatttcccggagtcaagagactttgaacgaagacaccccgcaccgcagtta
aaacctgtttcaacaataccaaaaatcaggtcggctttgaactttatgaagaaagaattg
ttcgaggtcccatttattgcaacatacagaaaagaatacatcgaaccagagttgaaagtt
gatgatctttggacaatatttgacttcgatgctaagtggacacaattgaatggaaggaaa
caaaatatgaaaaagctcttcgagcagatgcaaaaatatcaatttgaactcgtactcaaa
aatgaggacaaaaaagtcgatgaacatttcaggacacttgagcaagaagatattgatgca
ttagacaatgttcagggaatggaagagttgatggacgtgtacatgcagttccaattgtac
tactctgacgacatcccgaaaatgcaggcttggtttaaggacaaagagagggctgcaaag
aagtcgaagtcaaaagtaaaagagaaaacaaagaaaaaagaaagtagcgacggagttggt
gaaggagaagacagagagggtgaggatgataatacgaaagatggcctggatgagagtact
gaaaaagaaggagatgaagctgaggaggatgaagccacgaaggaagatgaggacgcaaat
gaagatgttgaagagacaagaaaaatacccaggaggagggatttctataccatttgtaag
gataatggcttgcttaatctgaccaagaaatttggcttgtcaccgctacagttcgcagag
aatttgagggataattaccagcgtcatgaaccagagcaagtgccggaagaaccagaagaa
ttggcagaacaatacatttgcaatggttttcaaacggcagcagcggtgttggaaggagct
cgtcatatgctagcggttcaaattgccaggactccgttggttcgccagagtgtcaggcaa
gcgttttttgacagggccaaagtcagtcttatcccaacaaaaaaggggaaaaaagaaatc
gacgacttccaccaatatgctgcttttaaatacatcaaacataagcctgtaagggatcta
caaggcgagcagttcctgaaaatgtgtcaagcagaaaaagaaggactcgtcgaagtaaaa
gtcggaatcgacttggatgcagaattaggctatactacatatctcgaggagattaagatg
ctgttctacagggacgagtacagtcgagtggttcaagaatggaataaacatagaacaaaa
gtcctcgtcaaagcattagaacaaattttatacccagcttttgcaaacgaactgaaatct
aagctgctgcgagagtcaacagattacgtcatacagctctgtgcgagaaaattgaagtct
ttgatagccgttgctccataccaaggggatagtcacgtgaggcaagaaagtgactttgga
gggcgtacggaaacggagcatggttgcagggtgctagcctgtggtttcatgccagatcag
aatgttgctgcattcatagcaatgttggatggtgatggtgaagtgatcgattttctaaga
ctgaaacatttattgaaaaggaggaatgttggaagacaggcagaccgagaggccaaggaa
cgggagtttgaaactgtcaagaagtttattttgaaccacagacctcacgttgtcgccgtg
actgcgcaatgcagggaggcgcaaaacgtcgtggaagatattcgttcttgtattgttgat
ttggaacaagagcagcagatggctcccatctatgttgagctggttgacggggaagttgct
aagatttacgaggcctcaccgagatctacgactgaatttaaagattacccgcctcttctt
cggcatgctgtgtctattggaaggaggctgcaagatcctttgattgaattcgccggcttg
tgtgacggagaaggcgaactagaatgcctaattttgcatccgcttcaggaattactccca
aaggagcagcttgcaaaagccctggaagtcgaattcatcaaccggacaaacgttgttggt
gttgatgtaaacagagctatagagcatccgcatgtcgcggcgctgatccagtttatttgt
ggactgggcccgaggaaaggtggagacctcattaagaaattgaaaacgcagacaacacgt
ttggaaaaccgatctcagttggttctaacatatggcatgggtccgcaagtattccttaat
tgcgccggttttattaaaatagacacctcgtcaatcggggacaatatggaagttcttgat
agcacgaggattcatccagaaacatatgactgggcgagaaagatggcagttgatgcactg
gaatacgatgacggtatggaagaggcccaaccctctgcggctgtggaggagattctggag
caacccgaccgcctgaaagacttagatttggacgcatttgccgatgaactggcacgtcaa
gggtatggaaataaacagataacgctctatgacatcagagatgaactgattaatcgcttc
aaagatcaccgtgtaccgtacagacagctagatccagatgagaagttcaagctgctgact
ggtgaaacggaggagactttgtttgttggtaagatggtcacttgcatcgtcacgggattc
gcctaccgtaagccgtcaagagaggctttggaccaagccaatcctgtgcgaaatgacgac
acaaatctttggcaatgtcccttttgcctcaaagataactttccagatctcagtgaggtc
tggacccatttcgataatggcagttgcgctggagaagcggtaggtgtccgggtacggctt
gacaacggaatctccggattcatcagcaacagaaacatcagcgataaaggtgtcaagagg
ccggaagatcgtgttcagcatggtatgactcttcatgcgcgggttttaaagctaaacatg
gaaaggttccaggttgatttgagttgcaaatcctctgatcttgcggacaaagaaaagaaa
tttagcccaccaaaagatttgtattatgatcacgatgcagcagataaagacaaaaaggtg
gaagaagacgctaaaaaggcgcttatgaaacgaacagcctatatcaagagagtcatctcg
caccctgccttcaaaaacttcaccttcagagatgctgaaaagtttctggaagatctggag
caaggtgaatgtgtcttcaggccaagtagcaagggtagtgatcatcttactgtgacttgg
aaagttcacacggcaatatatcaacacgttgatataagagaagaaggcaaagaaaacgtg
ttcagtttgggaaagtccttgtggattgagaatgaggagtacgaagatttagatgaaatt
atagcgcgatatattcagcccatgtcatcccaagcccgcgaaatcattaatcatcggtat
tatcgagagacagaaggtggcgtcaagcagaagttagaagaaattttagtgaccgaaaag
cgaaaaaacccgtccagaataccgtatttcttttccgcatcgcagacctaccccgggaag
ttcatgttgggctacatgcccaggaacaaaccgagagtagaatatgtcacagtttgccca
gaaggatttagatacagaggacgtgtgcacggaaatactaacgcgcttctccgctggttt
aaagagcatttcagagatcctataccaggtcttacccctaaactgacacgtacaccagga
ggcggctctactaacgccacgccgtacacccctggcggaacaccgcactctattttgacc
gacattgatatgagtcgcctcacacctttgtcgatgcaaggctattccaggggtacacca
gcacactcagccaacccagccgttgccattttgcagcaagaccaagctcgatcgtcccca
ggacagaattatggaaaccagcaatggaactcatacagacaaaatcaacagtttccagat
caatacaacaggtacgggaattactcttcaagacagaataccccgcagcaacagcaacag
caagaccagcagcagtatgttagataa
DBGET
integrated database retrieval system
