Rhopilema esculentum: 135684293
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Entry
135684293 CDS
T09994
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
res
Rhopilema esculentum
Pathway
res03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135684293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
res03021
]
135684293
Enzymes [BR:
res01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135684293
Transcription machinery [BR:
res03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
135684293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
YfjL_C
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
135684293
NCBI-ProteinID:
XP_065055867
LinkDB
All DBs
Position
Unknown
AA seq
1732 aa
AA seq
DB search
MFSTRMHGVSFQTFSTEDIKKQSVRQITNPETFDELLHPNPGGLYDRNLGPTDKTDICGS
CGLNYVFCPGHLGHIELPLPVYHPIFFRILLQFVNLSCYNCHSLLISRSKEHLLLKQLFV
IEKGQPGLILDLEEIFNAGLSESDHLNYNDKEDSVVERIDSFLNTVSASIQDCPEKTSKN
TTKYRQLLVKEFLGTTKTKKCPRCTAQARVFKSQYNSRLYMKPLSAKAAKRQHTLKTESN
ITETENVDENKENDPQEEKELDGEEVENGKQANQTFVNPIEVRDHLRKVFQKSKDLLKAI
FGSTLTTESADLNSVDMFFIDLVAVPPSRFRPVSSFGEKRFENPQTANLNRILIDCKLVC
KCLEETQKKDKDAEDNGQTTITMTTRRKNSAPIGVTGKTPAERLQNAWIKLQIDVNCHMD
SDLDKLSMDKVPGIRQLLEKKEGLFRKHMMGKRVNFAARSVISPDPYLNTDEIGIPEIFA
KKLTYAQPVTPWNCQKLRTAVTNGPNNHPGAVMVEHEDGRKVILSATNKSQREAIAKRLL
TPVTNEKPQLGCKKVYRHLVTGDVMLLNRQPTLHRPSIMAHKARVLPNERTIRLHYANCK
AYNADFDGDEMNAHFPQNELGRSEAYNLVSTNFQYLSPKDGKPLSGLIQDHVVSGVSMTS
RGVLFNKEDYHQLVFGALTDKPGKLVVLPPCILKPERLWSGKQVISTVLVNIIPDKNRLN
LDSKAKVNDTNWPKTHKKQAASPLLRNVIKDPFLNEVFVIIRSGEIMTGILDKNQYGSSQ
FGLVHCVYEVYGGVTSGKLLSALARLFTIYLRLRGFSLGVEDILVTQKANRKRWQLIESS
RCCGEEAAASALGLPENCERNELTERLQKAQYSNQGIDLKQLDLAMKKQTDMYQNKINSA
CVPQGLYRQFPDNSLQLMVQSGAKGSSVNCMQISSLLGQIELEGRRPPLMLSGRSLPSFL
AYDTSPRAGGFVDGRFLTGIRPQEYFFHCMAGREGLVDTAVKTSRSGYLQRCLIKHLEGL
MVQYDLSVRDSDGSVVQFLYGDDGVDVLKSQYLGGNQFQFIARNYKCYMRQLKPHLALKA
MEKEEATKKAKKVKKWINKHGMPTSSTFIHSKKSPYLLFEDDHKETLLSRSQHSSEEVQE
QLFNSWANLNAPTKHSYESKCRPCPDPVLSILRPDCHFGSISEAFFDTLNEYIAMNPNCL
LSKENDRKLVRTDQFYALMLFKYARSLAEPGEAVGLLAGQSIGEPSTQMTLNTFHFAGRG
EMNVTLGIPRLREILMTASSAIKTPTMDVLVWDGAAALKQAKKLQKKLNRVTLSDVIQKI
EVFESLAKDTKSGAKERYRQFRIRMEFLHRSVYKDDYSVTPKDILVYVERFFLRRIIMAV
RKLCRVKAVEKQMKAMEERLETAASFEDDGRDQGGFLDEDENDDVADVSDEELAGDDDAA
NSKSKSRQMQFSSYDEPDDEEKVNQSESDSEDESSRKRSPDAAGVVTDDAEVLENEAGAL
ENEAAGETEKEKRLTSVLSLDTVLDYSYDEKKNLWCDVTVKFPVTGTKVMLLSLIEALAE
KAVVNEAIGIKRAFLSESIAKGEEGKHRMKTEGVNILELWHYPEILQLSSLYSNDIHAVA
RTYGIEAARQVIIKEITNVFRVYGIQIDPRHLSLVADYMTFEGSYKPFNRQGIESNPFPL
QKMTFETTTHFLREASAFGRVDTLDSPSSRLVVGRVVKSGTGIFDLRQPLKW
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atgttttccacacgcatgcatggtgtgtctttccaaactttctcgactgaagacattaaa
aagcaaagcgtgagacagatcacaaatccagaaacgttcgatgagttgcttcacccaaat
ccaggaggcctctacgataggaatcttggacctacggacaaaactgatatttgtggctcc
tgcggcttgaattatgttttctgtccaggacacttaggccatattgaacttccattacca
gtatatcatccaatattctttcggattctgttgcaatttgtcaatttgtcctgttacaac
tgtcacagcttgttgatatcaaggtcaaaagagcatttacttttaaagcagctgtttgtc
attgaaaagggccagccaggacttattttggatcttgaagagatcttcaatgcaggtctt
tccgaaagtgatcatctaaactataacgacaaagaagacagtgtcgttgagagaattgat
tcttttcttaacacagtttctgcaagcatccaggattgtcctgaaaagacttcaaaaaac
acaacaaaatatagacagttgctggtaaaagaatttcttggaactactaagaccaagaag
tgccctaggtgtacagcccaggcaagagttttcaaatcacaatacaattcaaggttgtac
atgaaaccactttctgcaaaggcagctaagagacaacacactttgaaaactgaaagcaac
atcacagagacagaaaatgttgatgaaaacaaagaaaatgatccacaagaagaaaaggag
ttggatggtgaagaagtggagaatggaaagcaagccaatcaaacttttgtaaacccaatt
gaggtcagagaccatcttcgaaaagtcttccagaaaagcaaggatcttcttaaagctatt
tttggcagcaccttaacaacagaaagcgcagaccttaattcggtggacatgttttttatt
gatttggttgctgttccgccatcaaggttcagaccggtatctagttttggcgaaaagaga
ttcgaaaacccacagacggcaaatctgaacagaattctcatcgattgtaaactggtttgc
aaatgtttggaagagacgcagaagaaagacaaagacgcagaggataacgggcagacaact
attacgatgaccacaagaaggaaaaacagtgcccctattggagtaactggtaagacacca
gctgagaggcttcagaatgcttggataaagttgcagattgatgtgaattgccatatggat
agcgaccttgacaaactatccatggacaaagttcctgggatacggcagctgcttgaaaag
aaggaaggactttttcgcaaacacatgatgggaaagcgtgttaactttgcggcaagatct
gtaatttcacctgacccttacctgaacacagacgaaattggaattcctgagatctttgcg
aaaaaactgacgtatgcacaacctgttacgccctggaattgccagaaactcagaacagct
gtaaccaatgggcctaacaaccatcctggagccgtgatggttgagcatgaagacggtaga
aaagtgatattgagtgctaccaacaaaagccaaagggaggctatcgcaaaaaggctgctt
actccggttacaaatgaaaagcctcaactcggttgcaaaaaggtttacaggcatcttgtc
actggggacgttatgttactgaacagacaaccgactttgcatcgcccaagtataatggca
cataaggcaagagtccttccaaatgaacgaacaatacgtttgcactatgccaattgtaaa
gcatataacgcagactttgatggcgatgaaatgaatgcacatttcccacaaaacgaactg
ggacgctcggaggcatacaatcttgtgagcaccaatttccagtatctaagtccaaaggat
ggcaagcccttaagtggacttattcaagatcatgttgtgtcaggagtatcaatgacaagt
cgaggcgttttattcaataaagaggattatcatcaacttgtctttggagctttgactgac
aagcccgggaagttagtcgttttgcctccatgtatattgaagccagagcgactttggtca
ggaaaacaggttatctccaccgttttggtcaatatcataccagataaaaaccgactgaac
ctagatagcaaagccaaggttaatgacaccaactggccgaaaactcacaagaagcaggct
gcctcgccacttttacgaaacgtgataaaagatccttttcttaatgaagtatttgttatc
ataaggtcaggagaaattatgacagggattttggataagaaccaatatggttcttcgcaa
tttggtcttgtgcattgcgtctatgaagtatatggtggggttacctctggcaagcttctc
tcggcacttgcgaggctgtttactatctacttacgtttgcggggattcagtctgggtgta
gaagatattcttgtaacgcagaaagcaaacagaaaaagatggcagctgatcgaatctagc
cgatgctgtggagaggaagcagctgcttctgcccttggtttgccagagaattgtgaaaga
aacgagctgacagaacgattgcaaaaagcacaatactctaatcagggcattgacctgaag
cagttggatttagcaatgaagaaacaaacggatatgtaccaaaataagataaattcggca
tgtgttccacaaggtctttacaggcagttcccagataattcattgcagctaatggttcag
tcaggagcaaaagggtcgtctgttaactgcatgcagatctctagtttactgggacagatt
gagttggaaggacggagacccccgttaatgctttcaggtcgttctttgccttctttcctc
gcctacgatacaagtccaagggccgggggttttgtcgatggcagattccttaccggcatt
aggccgcaagagtatttctttcactgcatggctggtcgtgagggtttggttgacactgcc
gtaaagactagtcgttcaggctatctccaacgatgcctcatcaagcatttggaaggcctc
atggtgcaatatgatctgagtgtgagggacagtgatggctccgtagtgcaattcctatat
ggcgatgatggtgtcgatgtacttaaatcccagtacctaggcggtaatcagttccagttc
attgcaaggaactacaagtgctatatgcggcagttaaagcctcatttggctttgaaggca
atggaaaaagaggaggctaccaaaaaggccaaaaaggtaaaaaaatggatcaataaacac
ggaatgcctacaagctcaacatttattcattcgaaaaagtctccctacttgttatttgaa
gatgaccataaggaaacgctgttgagtagaagccaacattcctccgaggaggtacaagag
caactcttcaattcttgggcaaatcttaatgcgcctacaaaacacagctacgagtcaaaa
tgccgtccgtgtccggaccctgttttgtccattctccgtccagattgccactttggctcc
atttcagaggcatttttcgacacgctgaatgagtacattgcaatgaacccaaattgccta
cttagcaaagaaaatgacagaaaactcgttcgcacagatcagttttatgctttgatgcta
ttcaagtatgcaagatcgctggcagagccaggtgaagctgtaggccttcttgccggacaa
tccataggtgaaccctccacacagatgacactgaatacattccatttcgctggccgtggt
gagatgaacgtcaccttgggaattcctcgtctcagagagattctcatgactgcgagcagt
gccatcaaaaccccaacgatggatgttttagtatgggatggcgcagctgctttgaaacaa
gctaaaaagttgcagaaaaagcttaacagagtcaccttatcagatgttattcagaaaatt
gaagttttcgagagccttgccaaggatacaaagtcaggagctaaagagaggtacagacag
ttcagaataagaatggaattcttgcaccgatctgtttacaaggatgattattcagtcacg
cccaaagacattctggtttacgttgaaagattttttctgcgaaggattattatggcagtg
aggaagttgtgcagagtcaaggcagtcgagaagcaaatgaaggcgatggaggaacgattg
gagaccgccgcaagttttgaagacgacggtagagatcagggagggtttctggacgaagat
gaaaatgacgacgtagctgatgtttcggatgaagaacttgctggggatgacgatgctgca
aacagcaagagcaagagcaggcaaatgcagttttcgtcatatgatgaaccagatgatgaa
gagaaagtgaatcagagtgaatctgattctgaagatgaaagctcaagaaaacgttccccc
gacgctgctggtgttgttacagatgatgcagaagtactggaaaatgaggccggtgctttg
gaaaacgaggcagctggtgaaacggaaaaggaaaaaagattgacgagcgttttgagcctg
gatactgtcctggattacagctatgatgagaagaaaaacttgtggtgtgacgtcactgtt
aagtttccagtaacaggaactaaagtcatgttgctttcattgatcgaagctcttgcagaa
aaggctgttgttaatgaagctatcggtatcaaacgagcatttttgtcggaaagcatcgcg
aaaggagaggagggaaaacaccgtatgaaaacagaaggagtcaacattttggaattatgg
cattaccctgagatattgcaactgtccagtttatattcaaatgatatacatgctgttgca
aggacttatgggattgaagctgctagacaggtcattatcaaggaaatcacaaatgttttc
agagtctatggcattcagatagacccgcgccatctttctttggtggctgattacatgacg
tttgaaggcagctataaacctttcaacagacaaggcatcgagagcaatccattccctcta
caaaaaatgacgttcgaaacaaccacacattttctgcgcgaggcttctgcgtttgggcgc
gtggacactcttgattctccttcctccaggcttgttgttgggcgtgttgtaaagtcgggt
accgggatttttgacttaagacagcctcttaaatggtaa
DBGET
integrated database retrieval system
