Rhopilema esculentum: 135685503
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Entry
135685503 CDS
T09994
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
res
Rhopilema esculentum
Pathway
res03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135685503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
res03041
]
135685503
Spliceosome [BR:
res03041
]
Complex C
Other components
Step II factors
135685503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_Vps41
eIF2A
Beta-prop_VPS8
Beta-prop_NWD2_C
Beta-prop_HPS5
Tox-PLDMTX
Motif
Other DBs
NCBI-GeneID:
135685503
NCBI-ProteinID:
XP_065057544
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MAGLVDYAADSGSEEETGNAVNEELQLHLKGTSRSIEDMKSNMKLNIRPEVTSKNEHDKK
FLIDPTSKQLSYNPKYEQLFAPVVGPENPFKSRQQKATKNTLSGFVEEAHISDFQFDNQR
KTFHSYGYAVDPSEENATGEKIVGDQEKATSLKGVTVFEDTKARPGDKRRREEVGQPSDI
ESYKGPWAKFVDEAEVAKPSEEEQAILEKYEEAKQKKGKQEEEKIEEKTKLHIADAYDYQ
GRSYLHIPMDLGVNLLTDDPPEKCYLPKKRIHTWTGHSKGVAAVRLFPKSGHLLLSCSMD
CKIKLWEVYNKRRCIRTFIGHGKAVRDICFNNDGTKFLSCGYDRWIKLWDTETGECLGRF
SNNKVPYCVKFNPDEDKQNLFITGMADKKMITWDIRENEIVQEYDRHLGAVNTITFVDQN
KRIVTTSDDKSIRIWEWDIPVDTKYIADPGMHSMPSVSLSPNQKWLACQSMDNQIVIYSV
LNKFRQNRKKVFKGHMNAGYACQVNFSPDMNYLISGDADGKLNIWDWKSTKLYCKFKAHD
DVCIGCEWLPHETSKIVTCGWDGLIKLWD
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcttgttgattatgctgcagacagtggaagtgaagaagagactggaaatgcc
gttaatgaggagcttcaattgcatctaaaaggaacttcaaggtcaattgaggatatgaag
agtaatatgaagttgaatattagaccagaagtcacatctaagaatgaacatgataaaaag
tttttaattgacccaaccagcaaacaactttcttataatcctaaatatgaacagcttttt
gcaccggtggttggaccagaaaatccattcaaatcaaggcaacaaaaagcaactaagaat
actttatctggttttgtggaagaagcccacataagtgatttccagtttgataaccaaaga
aagacattccacagttatgggtatgcagtagacccaagtgaagagaatgcaacaggagag
aagatcgttggtgaccaggagaaagcaacctcattgaaaggtgttacagtttttgaagac
acaaaagcacgacctggtgacaagagacgtcgagaagaagtaggacaaccatctgatatc
gaatcatacaaaggcccctgggcgaagtttgttgatgaagctgaagttgcaaagccctct
gaggaagagcaagcaatacttgaaaaatacgaggaggcaaaacagaaaaaggggaaacaa
gaagaagagaaaattgaagagaaaacgaagttacacattgctgatgcgtatgattaccag
ggaagatcgtatctccatattcccatggatcttggcgtcaaccttcttacggacgatccc
cctgaaaaatgctatcttccgaaaaagaggattcatacatggactggtcattcaaaagga
gtggcagctgtgcgacttttcccaaaatctggtcatctgctcctatcgtgcagtatggac
tgcaaaatcaagttatgggaagtatataacaaaagacgttgcattcgaactttcattgga
catggaaaggctgttcgagatatttgtttcaataacgacggaacgaaattcctaagttgt
ggttatgatcggtggataaaactttgggataccgagacaggagaatgtcttggcagattc
agtaacaataaagtaccttattgtgttaaattcaacccagatgaggataaacagaattta
ttcatcacagggatggcagacaaaaaaatgataacgtgggatatacgggaaaatgaaatc
gtccaagaatatgacaggcatttaggagctgttaacaccatcacttttgtcgatcaaaac
aaaagaatcgtgacaacttcggatgacaagagcatcaggatatgggaatgggatattccc
gtcgatacgaaatacatcgcagatccaggaatgcattcaatgccatctgtctcattgtct
ccgaatcaaaaatggcttgcgtgtcaatcgatggacaatcaaattgtcatctacagcgtt
ttaaataaatttcgtcaaaacagaaagaaagtatttaaggggcacatgaatgctggctac
gcttgtcaagtcaacttttcaccagatatgaattatctcatatcgggagatgctgatggc
aaactgaacatatgggactggaaaagcacaaaactttactgcaaatttaaagctcacgac
gacgtttgcattggttgcgagtggcttcctcacgagacctcgaaaatagtgacttgcgga
tgggatggcctaatcaagctatgggattaa
DBGET
integrated database retrieval system
